RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CTPS2Q9NRF8 586 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 C6orf203Q9P0P8 240 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 KLHL13Q9P2N7 655 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 MTORP42345 2549 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 DEFB108AA8MXU0 73 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 AP3D1O14617 1153 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 CRATP43155 626 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 MAGEA8P43361 318 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 AQP5P55064 265 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 PPP2R2AP63151 447 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 C6orf10Q5SRN2 563 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 SLC2A7Q6PXP3 512 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 STAC2Q6ZMT1 411 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 FUNDC1Q8IVP5 155 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 CMIPQ8IY22 773 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 WDR60Q8WVS4 1066 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 PAIP1Q9H074 479 aaKnown RBP22.26■■□□□ 1.15
HMGN1-217ENST00000489072 SERINC1Q9NRX5 453 aa22.26■■□□□ 1.15
HMGN1-217ENST00000489072 INTS9Q9NV88 658 aaKnown RBP22.26■■□□□ 1.15
HMGN1-217ENST00000489072 ARGLU1Q9NWB6 273 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-217ENST00000489072 ING1Q9UK53 422 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-217ENST00000489072 SMAD9O15198 467 aaKnown RBP22.25■■□□□ 1.15
HMGN1-217ENST00000489072 PRKD3O94806 890 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 HOXB9P17482 250 aaPredicted RBP22.25■■□□□ 1.15
HMGN1-217ENST00000489072 CRYGSP22914 178 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 APOBEC1P41238 236 aaKnown RBP22.25■■□□□ 1.15
HMGN1-217ENST00000489072 SYT14P1Q58G82 188 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 GOLGA6L1Q8N7Z2 621 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 ZC3HAV1LQ96H79 300 aaKnown RBP22.25■■□□□ 1.15
HMGN1-217ENST00000489072 FOXC2Q99958 501 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 CCDC28BQ9BUN5 200 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 ZNF226Q9NYT6 803 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 P2RX2Q9UBL9 471 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 PCDHB14Q9Y5E9 798 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 DSPPQ9NZW4 1301 aa22.25■■□□□ 1.15
HMGN1-217ENST00000489072 THBDP07204 575 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 TFPTP0C1Z6 253 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 CD1EP15812 388 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 DNASE1P24855 282 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 IDH2P48735 452 aaKnown RBP22.24■■□□□ 1.15
HMGN1-217ENST00000489072 DSTNP60981 165 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 STX1BP61266 288 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 TMEM201Q5SNT2 666 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 MRPL2Q5T653 305 aaKnown RBP22.24■■□□□ 1.15
HMGN1-217ENST00000489072 BEND4Q6ZU67 534 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 GRINAQ7Z429 371 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 SLC43A2Q8N370 569 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 SLC38A5Q8WUX1 472 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 CKAP2Q8WWK9 683 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 PMM1Q92871 262 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 PSD2Q9BQI7 771 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 CXXC4Q9H2H0 198 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 GP6Q9HCN6 339 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 CHRNA9Q9UGM1 479 aa22.24■■□□□ 1.15
HMGN1-217ENST00000489072 SASH3O75995 380 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 ATE1O95260 518 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 BCHEP06276 602 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 DBIP07108 87 aaKnown RBP22.23■■□□□ 1.15
HMGN1-217ENST00000489072 YES1P07947 543 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 IL7RP16871 459 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 DIO1P49895 249 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 BLOC1S3Q6QNY0 202 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 TFAP2EQ6VUC0 442 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 TMPPEQ6ZT21 453 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 STK32CQ86UX6 486 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 VRK2Q86Y07 508 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 ADGRG3Q86Y34 549 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 SLC25A43Q8WUT9 341 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-217ENST00000489072 SLC52A3Q9NQ40 469 aa22.23■■□□□ 1.15
HMGN1-217ENST00000489072 CYTIPO60759 359 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 RAF1P04049 648 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 FESP07332 822 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 TFPIP10646 304 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 RPS26P11Q5JNZ5 115 aaPredicted RBP22.22■■□□□ 1.15
HMGN1-217ENST00000489072 PEX5LQ8IYB4 626 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 DNAJA3Q96EY1 480 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 PIK3IP1Q96FE7 263 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 ARL5BQ96KC2 179 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 OR11A1Q9GZK7 315 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 BCO1Q9HAY6 547 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 RLIMQ9NVW2 624 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 EDARQ9UNE0 448 aa22.22■■□□□ 1.15
HMGN1-217ENST00000489072 ZNF469Q96JG9 3925 aaPredicted RBP22.22■■□□□ 1.15
HMGN1-217ENST00000489072 ACANP16112 2415 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 A0A096LPI6 279 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 SULT2B1O00204 365 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 GCM2O75603 506 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-217ENST00000489072 NUDT7P0C024 238 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 LOXP28300 417 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-217ENST00000489072 CRISP3P54108 245 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 RASGEF1BQ0VAM2 473 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 EPS8Q12929 822 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 GNA13Q14344 377 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 RGNQ15493 299 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 ZNF836Q6ZNA1 936 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 MSRB3Q8IXL7 192 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 OR52P1PQ8NH57 321 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 MBD6Q96DN6 1003 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 TMEM19Q96HH6 336 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 MAGEB18Q96M61 343 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms