RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 SPAG4Q9NPE6 437 aa13.64□□□□□ -0.23
FDPS-213ENST00000489003 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
FDPS-213ENST00000489003 MED12LQ86YW9 2145 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 DOCK7Q96N67 2140 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 CD8B2A6NJW9 211 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 CLCA1A8K7I4 914 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 SYT5O00445 386 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 ADAMDEC1O15204 470 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 FESP07332 822 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 C8BP07358 591 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 UQCRBP14927 111 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 CALB2P22676 271 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 TACR3P29371 465 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 SFTPDP35247 375 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
FDPS-213ENST00000489003 COPZ1P61923 177 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 MXRA7P84157 204 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 WBP2NLQ6ICG8 309 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 MTFR2Q6P444 385 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 ESPNLQ6ZVH7 1005 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 CHMP1BQ7LBR1 199 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 MRGPRGQ86SM5 289 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 LSRQ86X29 649 aaPredicted RBP13.63□□□□□ -0.23
FDPS-213ENST00000489003 DEFB107AQ8IZN7 70 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 RNF148Q8N7C7 305 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
FDPS-213ENST00000489003 SSC4DQ8WTU2 575 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 RND1Q92730 232 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 ZNF845Q96IR2 970 aaPredicted RBP13.63□□□□□ -0.23
FDPS-213ENST00000489003 ARHGDIGQ99819 225 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 KLHL28Q9NXS3 571 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 CD300AQ9UGN4 299 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 SLC13A4Q9UKG4 626 aa13.63□□□□□ -0.23
FDPS-213ENST00000489003 TMED7-TICAM2A0A0A6YYA0 188 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 CXCR6O00574 342 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 EIF1AYO14602 144 aaKnown RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 TNFSF11O14788 317 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 TGM6O95932 706 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 CCNA2P20248 432 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 TIMP3P35625 211 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 HTR3AP46098 478 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 POLR2HP52434 150 aaKnown RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 CARD18P57730 90 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 SELENBP1Q13228 472 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 CYBRD1Q53TN4 286 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 RBM45Q8IUH3 476 aaKnown RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 LACC1Q8IV20 430 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 CCDC71Q8IV32 467 aaPredicted RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 TNIP2Q8NFZ5 429 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 OR10Q1Q8NGQ4 319 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 OR2V1Q8NHB1 315 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 RASSF5Q8WWW0 418 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 OSTF1Q92882 214 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 KLHL15Q96M94 604 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
FDPS-213ENST00000489003 NDE1Q9NXR1 346 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 TMED7Q9Y3B3 224 aa13.62□□□□□ -0.23
FDPS-213ENST00000489003 A0A0G2JNJ9 132 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 MBD3L4A6NDZ8 208 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 MBD3L3A6NE82 208 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 MBD3L5A6NJ08 208 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 GJE1A6NN92 205 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 M0R3H8 397 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 GSTA4O15217 222 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 CXCL13O43927 109 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 UBOX5O94941 541 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 IFNA14P01570 189 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 NCK1P16333 377 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 ME2P23368 584 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 HTR2AP28223 471 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 HTR1EP28566 365 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 EIF1AXP47813 144 aaKnown RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 SMSP52788 366 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 SELENOWP63302 87 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 SGCBQ16585 318 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 NRF1Q16656 503 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 SAMD4BQ5PRF9 694 aaKnown RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 RIPPLY2Q5TAB7 128 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 HBMQ6B0K9 141 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 GLYATQ6IB77 296 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 LSMEM1Q8N8F7 131 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 C9orf106Q8NAJ2 232 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 FAM156AQ8NDB6 213 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 OR52E4Q8NGH9 312 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 OR6T1Q8NGN1 323 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 OR10D3Q8NH80 312 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 MBD3L2Q8NHZ7 208 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
FDPS-213ENST00000489003 FIG4Q92562 907 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 WNT2BQ93097 391 aa13.61□□□□□ -0.23
FDPS-213ENST00000489003 ZNF559Q9BR84 538 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms