RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 KAT8Q9H7Z6 458 aaKnown RBP13.53□□□□□ -0.24
CXCL12-207ENST00000488591 NANOGQ9H9S0 305 aa13.53□□□□□ -0.24
CXCL12-207ENST00000488591 SETXQ7Z333 2677 aaKnown RBP13.52□□□□□ -0.24
CXCL12-207ENST00000488591 AP3D1O14617 1153 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CXCL13O43927 109 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 COX4I1P13073 169 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 COX6B1P14854 86 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 PRKAR1BP31321 381 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 SLC1A3P43003 542 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 AGFG1P52594 562 aaKnown RBP13.52□□□□□ -0.25
CXCL12-207ENST00000488591 DLX5P56178 289 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 SELPLGQ14242 412 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 ADRM1Q16186 407 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CTU2Q2VPK5 515 aaKnown RBP13.52□□□□□ -0.25
CXCL12-207ENST00000488591 GCNT2Q8N0V5 402 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CLIP4Q8N3C7 705 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 POU5F2Q8N7G0 328 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 OR10A6Q8NH74 314 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 SLC35B4Q969S0 331 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CPNE4Q96A23 557 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF524Q96C55 264 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 ADGRG7Q96K78 797 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CCDC106Q9BWC9 280 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 SLC13A4Q9UKG4 626 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 DOCK7Q96N67 2140 aa13.52□□□□□ -0.25
CXCL12-207ENST00000488591 CACNA1CQ13936 2221 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 KIAA1549Q9HCM3 1950 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
CXCL12-207ENST00000488591 PLGP00747 810 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-207ENST00000488591 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 TFPIP10646 304 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 SHC1P29353 583 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 AQP1P29972 269 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 ASCL1P50553 236 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 POLR2HP52434 150 aaKnown RBP13.51□□□□□ -0.25
CXCL12-207ENST00000488591 MAP2K6P52564 334 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 PLAURQ03405 335 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 FOXF2Q12947 444 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
CXCL12-207ENST00000488591 WBP2NLQ6ICG8 309 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 NET1Q7Z628 596 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-207ENST00000488591 PTOV1Q86YD1 416 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 ARMC8Q8IUR7 673 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 MCEMP1Q8IX19 187 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 RCN3Q96D15 328 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 OR5B2Q96R09 309 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 SLC39A3Q9BRY0 314 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 PIGMQ9H3S5 423 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 RNF122Q9H9V4 155 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 CTPS2Q9NRF8 586 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 KLHL28Q9NXS3 571 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 CHRNA9Q9UGM1 479 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 AP3M1Q9Y2T2 418 aa13.51□□□□□ -0.25
CXCL12-207ENST00000488591 TMED7-TICAM2A0A0A6YYA0 188 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 A0A1W2PNV4 684 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 EEF1E1-BLOC1S5C9J1V9 151 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 C19orf84I3L1E1 186 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 FXYD1O00168 92 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 AIM2O14862 343 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ADAM11O75078 769 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 TACR3P29371 465 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ACAA2P42765 397 aaKnown RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 CLK1P49759 484 aaKnown RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 TFF3Q07654 80 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 SYT14P1Q58G82 188 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ERICH5Q6P6B1 374 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 DHRS4L2Q6PKH6 230 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ARPINQ7Z6K5 226 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ZZZ3Q8IYH5 903 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 CADM2Q8N3J6 435 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 RELL2Q8NC24 303 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 SPOCK3Q9BQ16 436 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 PIF1Q9H611 641 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 EVA1AQ9H8M9 152 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 GLRX2Q9NS18 164 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 FOXD3Q9UJU5 478 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-207ENST00000488591 ARL2BPQ9Y2Y0 163 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 EMC9Q9Y3B6 208 aa13.5□□□□□ -0.25
CXCL12-207ENST00000488591 A0A1W2PNR3 127 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 SYT5O00445 386 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 AQP8O94778 261 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 CCNA2P20248 432 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 CXCR1P25024 350 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 UQCRC1P31930 480 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 PCGF2P35227 344 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 PEX19P40855 299 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 CTBP2P56545 445 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 RAC3P60763 192 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 CSNK2A1P68400 391 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms