RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SLC2A7Q6PXP3 512 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 GTF2IRD2Q86UP8 949 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 STK32CQ86UX6 486 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 CMIPQ8IY22 773 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 SLC25A43Q8WUT9 341 aaPredicted RBP15.82■□□□□ 0.12
ITGB1-215ENST00000488494 ZC3HAV1LQ96H79 300 aaKnown RBP15.82■□□□□ 0.12
ITGB1-215ENST00000488494 CCDC106Q9BWC9 280 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 VIPAS39Q9H9C1 493 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 TPT1P8Q9HAU6 139 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 CTPS2Q9NRF8 586 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 ZNF226Q9NYT6 803 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 HEATR5AQ86XA9 2040 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 DEFB108AA8MXU0 73 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 SMAD9O15198 467 aaKnown RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 FESP07332 822 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 CRYGSP22914 178 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 MRPL19P49406 292 aaKnown RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 RAC3P60763 192 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 GNA13Q14344 377 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 RPS26P11Q5JNZ5 115 aaPredicted RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 MRPL2Q5T653 305 aaKnown RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 TFAP2EQ6VUC0 442 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 STAC2Q6ZMT1 411 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 GRINAQ7Z429 371 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 LSRQ86X29 649 aaPredicted RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 TUSC5Q8IXB3 177 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 GTF2H4Q92759 462 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 PAIP1Q9H074 479 aaKnown RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 PLEKHF2Q9H8W4 249 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 DSPPQ9NZW4 1301 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 CHRNA9Q9UGM1 479 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 EDARQ9UNE0 448 aa15.81■□□□□ 0.12
ITGB1-215ENST00000488494 SPIN1Q9Y657 262 aaPredicted RBP15.81■□□□□ 0.12
ITGB1-215ENST00000488494 PRKD3O94806 890 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 ATE1O95260 518 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 RAF1P04049 648 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 DBIP07108 87 aaKnown RBP15.8■□□□□ 0.12
ITGB1-215ENST00000488494 TFPIP10646 304 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 IL7RP16871 459 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 APOBEC1P41238 236 aaKnown RBP15.8■□□□□ 0.12
ITGB1-215ENST00000488494 IDH2P48735 452 aaKnown RBP15.8■□□□□ 0.12
ITGB1-215ENST00000488494 DIO1P49895 249 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 CRISP3P54108 245 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 BEND4Q6ZU67 534 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 NUFIP2Q7Z417 695 aaKnown RBP15.8■□□□□ 0.12
ITGB1-215ENST00000488494 PEX5LQ8IYB4 626 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 SLC43A2Q8N370 569 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 DNAJA3Q96EY1 480 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 PIK3IP1Q96FE7 263 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 FOXC2Q99958 501 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 CCDC28BQ9BUN5 200 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 OR11A1Q9GZK7 315 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 MTHFD2LQ9H903 347 aaPredicted RBP15.8■□□□□ 0.12
ITGB1-215ENST00000488494 GP6Q9HCN6 339 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 CALML5Q9NZT1 146 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 KLHL9Q9P2J3 617 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 ITPR3Q14573 2671 aa15.8■□□□□ 0.12
ITGB1-215ENST00000488494 HOXB9P17482 250 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-215ENST00000488494 CCNA2P20248 432 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 KEAP1Q14145 624 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 LIN52Q52LA3 116 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 ZNF836Q6ZNA1 936 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 C22orf34Q6ZV56 151 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 VRK2Q86Y07 508 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 OR52P1PQ8NH57 321 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 SLC38A5Q8WUX1 472 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 PMM1Q92871 262 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 TMEM19Q96HH6 336 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 PSD2Q9BQI7 771 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 TACO1Q9BSH4 297 aaKnown RBP15.79■□□□□ 0.12
ITGB1-215ENST00000488494 ACTR6Q9GZN1 396 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 FANCFQ9NPI8 374 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 RLIMQ9NVW2 624 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 CCDC167Q9P0B6 97 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 ING1Q9UK53 422 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-215ENST00000488494 ZNF443Q9Y2A4 671 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-215ENST00000488494 PCDHB14Q9Y5E9 798 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 MPDZO75970 2070 aa15.79■□□□□ 0.12
ITGB1-215ENST00000488494 A0A096LPI6 279 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 TMEM247A6NEH6 219 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CFAP73A6NFT4 308 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 SULT2B1O00204 365 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CYTIPO60759 359 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 SASH3O75995 380 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 THBDP07204 575 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 YES1P07947 543 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 TFPTP0C1Z6 253 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 UQCRBP14927 111 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 PPP3CBP16298 524 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CSNK2A1P68400 391 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-215ENST00000488494 EPS8Q12929 822 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 ABLIM2Q6H8Q1 611 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 BLOC1S3Q6QNY0 202 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 TMPPEQ6ZT21 453 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CXorf67Q86X51 503 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-215ENST00000488494 FUNDC1Q8IVP5 155 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CKAP2Q8WWK9 683 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 SPDL1Q96EA4 605 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 THOC1Q96FV9 657 aaKnown RBP15.78■□□□□ 0.12
ITGB1-215ENST00000488494 ARL5BQ96KC2 179 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms