RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NDUFAF7Q7L592 441 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 NUP54Q7Z3B4 507 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 MISPQ8IVT2 679 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CDK20Q8IZL9 346 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SLC15A4Q8N697 577 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TCEANCQ8N8B7 351 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 DEFB124Q8NES8 71 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 OR13C2Q8NGS9 318 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SLC22A8Q8TCC7 542 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 GGHQ92820 318 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SH3YL1Q96HL8 342 aaPredicted RBP8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TUBA1CQ9BQE3 449 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 COPS4Q9BT78 406 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 B3GNT4Q9C0J1 378 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 VCX3AQ9NNX9 186 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 AMBNQ9NP70 447 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CLN6Q9NWW5 311 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 TVP23BQ9NYZ1 205 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 SNX5Q9Y5X3 404 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 CEPT1Q9Y6K0 416 aa8.62□□□□□ -1.03
SF3B1-211ENST00000487698 DOCK10Q96BY6 2186 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 CNOT1A5YKK6 2376 aaKnown RBP8.61□□□□□ -1.03
SF3B1-211ENST00000487698 GVINP1Q7Z2Y8 2422 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 EFCAB9A8MZ26 197 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 ENTPD6O75354 484 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 PTP4A3O75365 173 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 PIPP12273 146 aaPredicted RBP8.61□□□□□ -1.03
SF3B1-211ENST00000487698 P2RX1P51575 399 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 TOMM34Q15785 309 aaPredicted RBP8.61□□□□□ -1.03
SF3B1-211ENST00000487698 NTRK2Q16620 822 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 SYT14P1Q58G82 188 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 GPR141Q7Z602 305 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 ESX1Q8N693 406 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 OR13F1Q8NGS4 319 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 OR5W2Q8NH69 310 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM163Q8TC26 289 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 MUL1Q969V5 352 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 TMCO6Q96DC7 493 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 SAMD8Q96LT4 415 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 Q96MT0 163 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 RASL10BQ96S79 203 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 PRRG3Q9BZD7 231 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 UBQLN3Q9H347 655 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 HHATLQ9HCP6 504 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 GPR83Q9NYM4 423 aa8.61□□□□□ -1.03
SF3B1-211ENST00000487698 CNOT2Q9NZN8 540 aaKnown RBP8.61□□□□□ -1.03
SF3B1-211ENST00000487698 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ELOA3DA6NLF2 546 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 B4DXG7 233 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 BHLHE40O14503 412 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 GNB5O14775 395 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SURF4O15260 269 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CDC40O60508 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SEC14L2O76054 403 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 RCBTB2O95199 551 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CDK1P06493 297 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 FTH1P19P0C7X4 201 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SAGP10523 405 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 PGCP20142 388 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 TTKP33981 857 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CRYZQ08257 329 aaKnown RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CBFBQ13951 182 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SNAPC1Q16533 368 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ELOA3BQ3SY89 546 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SMARCD3Q6STE5 483 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SLC46A3Q7Z3Q1 461 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SLC43A2Q8N370 569 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ELOA3Q8NG57 546 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 OR5M3Q8NGP4 307 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 FAR1Q8WVX9 515 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 MYDGFQ969H8 173 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 NACC2Q96BF6 587 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SPACA9Q96E40 222 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SLC38A2Q96QD8 506 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 CCDC90BQ9GZT6 254 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ENKD1Q9H0I2 346 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 MED17Q9NVC6 651 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 DNAJC27Q9NZQ0 273 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 IL20RAQ9UHF4 553 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 TRAV27A0A087WT01 109 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 NSG1A0A0A6YYJ2 146 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 EFCAB10A6NFE3 127 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 H3BSA7 217 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 TLX2O43763 284 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 HCN1O60741 890 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ACVR2AP27037 513 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 TACR3P29371 465 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 GRK5P34947 590 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 PTGDSP41222 190 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms