RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 PRSS57Q6UWY2 283 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 CLEC9AQ6UXN8 241 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 Q71RC1 249 aaPredicted RBP20.95■□□□□ 0.94
PLOD3-215ENST00000487563 RNF130Q86XS8 419 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 ARFGAP2Q8N6H7 521 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 FAM71CQ8NEG0 241 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 ZHX1-C8orf76Q96EF9 292 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 TEX37Q96LM6 180 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 OR52E6Q96RD3 313 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 SAP130Q9H0E3 1048 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 CXorf56Q9H5V9 222 aa20.95■□□□□ 0.94
PLOD3-215ENST00000487563 GOLGA8QA0A0J9YX86 632 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 GOLGA8OA6NCC3 632 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 CCDC154A6NI56 674 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 GOLGA8NF8WBI6 632 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 HS3ST1O14792 307 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 HOXB4P17483 251 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 APOBEC1P41238 236 aaKnown RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 OR3A2P47893 321 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 PTH2RP49190 550 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 ITGADQ13349 1161 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 TMPPEQ6ZT21 453 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 BHLHA15Q7RTS1 189 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 HSD17B8Q92506 261 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF775Q96BV0 537 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF300Q96RE9 604 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 USB1Q9BQ65 265 aaKnown RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 POTEKPQ9BYX7 375 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 GSX2Q9BZM3 304 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 ESRP2Q9H6T0 727 aaKnown RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 WDR55Q9H6Y2 383 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-215ENST00000487563 CTPS2Q9NRF8 586 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 THAP1Q9NVV9 213 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 RNF115Q9Y4L5 304 aa20.94■□□□□ 0.94
PLOD3-215ENST00000487563 FAM171A2A8MVW0 826 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 H7C1Q1 480 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 HMGN4O00479 90 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 HDAC3O15379 428 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 CLOCKO15516 846 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 BCAS1O75363 584 aaPredicted RBP20.93■□□□□ 0.94
PLOD3-215ENST00000487563 PGRP06401 933 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 KITP10721 976 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 EPHA3P29320 983 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 KCNJ10P78508 379 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 CHRNEQ04844 493 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 LTBQ06643 244 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 LRRC74AQ0VAA2 488 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 TAB1Q15750 504 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ATG16L1Q676U5 607 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 NXNQ6DKJ4 435 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF621Q6ZSS3 439 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 Q6ZT83 130 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 GRINAQ7Z429 371 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF100Q8IYN0 542 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF611Q8N823 705 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 AKAP1Q92667 903 aaKnown RBP eCLIP20.93■□□□□ 0.94
PLOD3-215ENST00000487563 TMEM204Q9BSN7 226 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 BDH2Q9BUT1 245 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 EXOSC3Q9NQT5 275 aaKnown RBP20.93■□□□□ 0.94
PLOD3-215ENST00000487563 EMC3Q9P0I2 261 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 CHRNA9Q9UGM1 479 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 PRSS50Q9UI38 385 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ING1Q9UK53 422 aaPredicted RBP20.93■□□□□ 0.94
PLOD3-215ENST00000487563 LIPT1Q9Y234 373 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 ROS1P08922 2347 aa20.93■□□□□ 0.94
PLOD3-215ENST00000487563 VPS13CQ709C8 3753 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF724A8MTY0 619 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 ZNF814B7Z6K7 855 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 CD3EP07766 207 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 WDR4P57081 412 aaKnown RBP20.92■□□□□ 0.94
PLOD3-215ENST00000487563 TXNL4AP83876 142 aaKnown RBP20.92■□□□□ 0.94
PLOD3-215ENST00000487563 STK11Q15831 433 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.92■□□□□ 0.94
PLOD3-215ENST00000487563 GALNT5Q7Z7M9 940 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 ANKFN1Q8N957 763 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 RAB3IL1Q8TBN0 382 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 ZG16BQ96DA0 208 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 COX4I2Q96KJ9 171 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 TRNT1Q96Q11 434 aaKnown RBP20.92■□□□□ 0.94
PLOD3-215ENST00000487563 INPP5KQ9BT40 448 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 CCDC106Q9BWC9 280 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 NKIRAS1Q9NYS0 192 aa20.92■□□□□ 0.94
PLOD3-215ENST00000487563 CLDN24A6NM45 220 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 SLCO1B7G3V0H7 640 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 LYZL6O75951 148 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 C1QCP02747 245 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 GSNP06396 782 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 IL12AP29459 219 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 CDKN2CP42773 168 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 GNA13Q14344 377 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 SYPL1Q16563 259 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 MTDHQ86UE4 582 aaKnown RBP20.91■□□□□ 0.94
PLOD3-215ENST00000487563 PNPT1Q8TCS8 783 aaKnown RBP20.91■□□□□ 0.94
PLOD3-215ENST00000487563 DNAJA3Q96EY1 480 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 GPR45Q9Y5Y3 372 aa20.91■□□□□ 0.94
PLOD3-215ENST00000487563 PRAMEF27A3QJZ7 478 aa20.9■□□□□ 0.94
PLOD3-215ENST00000487563 SMAD7O15105 426 aaKnown RBP20.9■□□□□ 0.94
PLOD3-215ENST00000487563 TMCC2O75069 709 aa20.9■□□□□ 0.94
PLOD3-215ENST00000487563 SNNO75324 88 aaPredicted RBP20.9■□□□□ 0.94
PLOD3-215ENST00000487563 NR2F1P10589 423 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms