RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PPIAL4GP0DN37 164 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PSMA2P25787 234 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 CA8P35219 290 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 ALDH3B2P48448 385 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 NTHL1P78549 312 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PAX2Q02962 417 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 CYP51A1Q16850 503 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TPD52L1Q16890 204 aaPredicted RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 CCDC152Q4G0S7 254 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 MYPOPQ86VE0 399 aaPredicted RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TBC1D21Q8IYX1 336 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 ZSCAN4Q8NAM6 433 aaPredicted RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 M1APQ8TC57 530 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PNPT1Q8TCS8 783 aaKnown RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TFB1MQ8WVM0 346 aaKnown RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PPP1R16AQ96I34 528 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TTC25Q96NG3 672 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 APOL2Q9BQE5 337 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 FEM1AQ9BSK4 669 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TM2D1Q9BX74 207 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TEX13BQ9BXU2 312 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 COA1Q9GZY4 146 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 RMND5AQ9H871 391 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 MEAF6Q9HAF1 191 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 SENP1Q9P0U3 644 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC2A6Q9UGQ3 507 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 XPO7Q9UIA9 1087 aaKnown RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 ANAPC7Q9UJX3 599 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PLXNA1Q9UIW2 1896 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 A8MX80 341 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 PPIAL4DF5H284 164 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC17A2O00624 439 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 TBX19O60806 448 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 NEBLO76041 1014 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC2A10O95528 541 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 OPN1LWP04000 364 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 IGF1P05019 195 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 BCKDHAP12694 445 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 HOXD10P28358 340 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 BDKRB1P46663 353 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC8A3P57103 927 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 ERVPABLB-1P60509 514 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 RGS1Q08116 209 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 PJVKQ0ZLH3 352 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 ZNF154Q13106 437 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 PEX6Q13608 980 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 ATXN7L3Q14CW9 347 aaPredicted RBP3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 PDK4Q16654 411 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 DCST2Q5T1A1 773 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 GCNT7Q6ZNI0 430 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 Q8N9G6 341 aaPredicted RBP3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 VN1R17PQ8TDU5 208 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 ADAMTS16Q8TE57 1224 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 ZNF606Q8WXB4 792 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC30A2Q9BRI3 323 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 OPN3Q9H1Y3 402 aaPredicted RBP3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 MRPL39Q9NYK5 338 aaKnown RBP3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 CYTH4Q9UIA0 394 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 CRLS1Q9UJA2 301 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 GSTK1Q9Y2Q3 226 aa3.81□□□□□ -1.8
PRPF38A-203ENST00000487160 TTC28Q96AY4 2481 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 SAGE2PA6NJ88 616 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 TRIM64CA6NLI5 447 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 H0YCG3 227 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 TRIM3O75382 744 aaPredicted RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 NOL4O94818 638 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 PCCAP05165 728 aaPredicted RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 HBQ1P09105 142 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 SLC35E2P0CK97 266 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 PRG2P13727 222 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 RPA2P15927 270 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 ATP5A1P25705 553 aaKnown RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 PTBP1P26599 531 aaKnown RBP eCLIP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 MAGEA9P43362 315 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 GNPDA1P46926 289 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 RGS4P49798 205 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 BDH1Q02338 343 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 PPIL2Q13356 520 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 SELPLGQ14242 412 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 RABGAP1LQ5R372 815 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 SERINC5Q86VE9 423 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 IFNEQ86WN2 208 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 ERO1BQ86YB8 467 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 MYLPFQ96A32 169 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 SDSLQ96GA7 329 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 PLEKHF1Q96S99 279 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 CCT8L2Q96SF2 557 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 CDX2Q99626 313 aaPredicted RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 CRACR2AQ9BSW2 395 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 ALG12Q9BV10 488 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 C11orf49Q9H6J7 331 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 TDRD3Q9H7E2 651 aaKnown RBP3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 CD209Q9NNX6 404 aa3.8□□□□□ -1.8
PRPF38A-203ENST00000487160 EHFQ9NZC4 300 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms