RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 WBP2NLQ6ICG8 309 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 RANBP3LQ86VV4 465 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 FAM98AQ8NCA5 519 aaKnown RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 FAM83FQ8NEG4 500 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF563Q8TA94 476 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 ADAM19Q9H013 955 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 DEFB127Q9H1M4 99 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TMEM27Q9HBJ8 222 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 S100A14Q9HCY8 104 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TESQ9UGI8 421 aaKnown RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 RIMS3Q9UJD0 308 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 DKKL1Q9UK85 242 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 RPH3AQ9Y2J0 694 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 AP4S1Q9Y587 144 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 A0A087WZY1 265 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-229ENST00000486665 EFNA2O43921 213 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 TIPRLO75663 272 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 KRT36O76013 467 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 HPNP05981 417 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 RHCEP18577 417 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 IL11P20809 199 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 SLC1A3P43003 542 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF41P51814 821 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-229ENST00000486665 CDH12P55289 794 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 DLX5P56178 289 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 B3GALT5-AS1P59052 145 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 TAS2R41P59536 307 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 COPZ1P61923 177 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 FOXF1Q12946 379 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 WIPI1Q5MNZ9 446 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF787Q6DD87 383 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 PLEKHM3Q6ZWE6 761 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 GDF7Q7Z4P5 450 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 SLC22A16Q86VW1 577 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ADAMTS16Q8TE57 1224 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 C3orf49Q96BT1 292 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 SLC41A3Q96GZ6 507 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 OR2B2Q9GZK3 357 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ARMC1Q9NVT9 282 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 B4GALT7Q9UBV7 327 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 ACAD8Q9UKU7 415 aa11.56□□□□□ -0.56
HDAC6-229ENST00000486665 MRPS18CQ9Y3D5 142 aaKnown RBP11.56□□□□□ -0.56
HDAC6-229ENST00000486665 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 A0A0B4J2E0 115 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 A0A1B0GX12 115 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TRAPPC13A5PLN9 417 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 FAM47E-STBD1D6RA91 191 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 OR5F1O95221 314 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 UQCRBP14927 111 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ITGA2P17301 1181 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 CCNA2P20248 432 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TACR3P29371 465 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 MERTKQ12866 999 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 GANABQ14697 944 aaKnown RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 SLC10A1Q14973 349 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 GLYR1Q49A26 553 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 CMPK2Q5EBM0 449 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF613Q6PF04 617 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ATG4DQ86TL0 474 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ADGRG3Q86Y34 549 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 SIAH3Q8IW03 269 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 FAM109AQ8N4B1 249 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 CISD2Q8N5K1 135 aaKnown RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 PIK3C3Q8NEB9 887 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 OR14L1PQ8NHC6 308 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ZBTB8AQ96BR9 441 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 PRRC1Q96M27 445 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF347Q96SE7 839 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 PIP5K1AQ99755 562 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TSPAN10Q9H1Z9 355 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 SLC6A15Q9H2J7 730 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 ZDHHC11Q9H8X9 412 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 NMNAT1Q9HAN9 279 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 MAN2C1Q9NTJ4 1040 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 VNN3Q9NY84 501 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 RPS6KB2Q9UBS0 482 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 OSGIN1Q9UJX0 560 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 SLC7A7Q9UM01 511 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 RRP15Q9Y3B9 282 aaKnown RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 FAM32AQ9Y421 112 aaKnown RBP11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TESMINQ9Y4I5 508 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 LIPGQ9Y5X9 500 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
HDAC6-229ENST00000486665 TMED7-TICAM2A0A0A6YYA0 188 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 OR2M5A3KFT3 312 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 C7orf72A4D263 438 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 NPIPA5E9PKD4 350 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ACOT7O00154 380 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 CLDN1O95832 211 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF24P17028 368 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms