RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ZNF619Q8N2I2 560 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 SLC25A43Q8WUT9 341 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-214ENST00000486311 XAGE5Q8WWM1 108 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF75CPQ92670 426 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-214ENST00000486311 NEURL3Q96EH8 262 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 PRSS50Q9UI38 385 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 SLC35A3Q9Y2D2 325 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 WDR45Q9Y484 360 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 ZANQ9Y493 2812 aa19.87■□□□□ 0.77
SREBF1-214ENST00000486311 CLOCKO15516 846 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 CD3EP07766 207 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 LBPP18428 481 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 DIO1P49895 249 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 CLNS1AP54105 237 aaKnown RBP19.86■□□□□ 0.77
SREBF1-214ENST00000486311 ATP5J2P56134 94 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 RPS4XP62701 263 aaKnown RBP19.86■□□□□ 0.77
SREBF1-214ENST00000486311 DPY19L1Q2PZI1 675 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 SYT14P1Q58G82 188 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 SPANXN4Q5MJ08 99 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 PIWIL2Q8TC59 973 aaKnown RBP19.86■□□□□ 0.77
SREBF1-214ENST00000486311 RAB8BQ92930 207 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 ROPN1LQ96C74 230 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF300Q96RE9 604 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-214ENST00000486311 NUF2Q9BZD4 464 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF446Q9NWS9 450 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 LAMP3Q9UQV4 416 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 TLN2Q9Y4G6 2542 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 NUP214P35658 2090 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-214ENST00000486311 USF3Q68DE3 2245 aa19.86■□□□□ 0.77
SREBF1-214ENST00000486311 CSPG4Q6UVK1 2322 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 C9JVG2 144 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 BCAS1O75363 584 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 FESP07332 822 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 BGNP21810 368 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 EDNRAP25101 427 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 APOBEC1P41238 236 aaKnown RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 KHKP50053 298 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 CSNK2A1P68400 391 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 MPP2Q14168 576 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 CAPRIN1Q14444 709 aaKnown RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 FRRS1Q6ZNA5 592 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 GALNT5Q7Z7M9 940 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 FBXW5Q969U6 566 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF775Q96BV0 537 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 CCDC106Q9BWC9 280 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 SPIN1Q9Y657 262 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-214ENST00000486311 PRR14LQ5THK1 2151 aa19.85■□□□□ 0.77
SREBF1-214ENST00000486311 OVOL3O00110 214 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 SULT2B1O00204 365 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 SASH3O75995 380 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 DANCRP0C864 163 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 PDK3Q15120 406 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 TNFAIP8L3Q5GJ75 292 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 ABLIM2Q6H8Q1 611 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 OGFOD2Q6N063 350 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 ATG4DQ86TL0 474 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-214ENST00000486311 MTDHQ86UE4 582 aaKnown RBP19.84■□□□□ 0.77
SREBF1-214ENST00000486311 ZG16BQ96DA0 208 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 CCDC115Q96NT0 180 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 MEAF6Q9HAF1 191 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 TMBIM4Q9HC24 238 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 EXOSC3Q9NQT5 275 aaKnown RBP19.84■□□□□ 0.77
SREBF1-214ENST00000486311 MARCOQ9UEW3 520 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-214ENST00000486311 BTNL2Q9UIR0 455 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 JMJD1CQ15652 2540 aa19.84■□□□□ 0.77
SREBF1-214ENST00000486311 IGKV3D-15A0A087WSY6 115 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 PRAMEF27A3QJZ7 478 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 DPRXA6NFQ7 191 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 E9PBE3 544 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 LYZL6O75951 148 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 SOD3P08294 240 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 COX5AP20674 150 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 S100A3P33764 101 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 CHI3L1P36222 383 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-214ENST00000486311 BSPH1Q075Z2 132 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 STX3Q13277 289 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 FAM174BQ3ZCQ3 159 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF672Q499Z4 452 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-214ENST00000486311 HSP90B2PQ58FF3 399 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 AGBL2Q5U5Z8 902 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 DNAJC14Q6Y2X3 702 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-214ENST00000486311 GRINAQ7Z429 371 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 ZNF563Q8TA94 476 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 NEUROG1Q92886 237 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 SLC35A5Q9BS91 424 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 CTPS2Q9NRF8 586 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-214ENST00000486311 PNPOQ9NVS9 261 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 EMC3Q9P0I2 261 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 CHRNA9Q9UGM1 479 aa19.83■□□□□ 0.77
SREBF1-214ENST00000486311 HIVEP2P31629 2446 aa19.83■□□□□ 0.76
SREBF1-214ENST00000486311 HMGN4O00479 90 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 TFPIP10646 304 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 IGHV1-2P23083 117 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 FKBP2P26885 142 aaKnown RBP19.82■□□□□ 0.76
SREBF1-214ENST00000486311 RYKP34925 604 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 KCNJ10P78508 379 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 HPCAP84074 193 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 PLAURQ03405 335 aa19.82■□□□□ 0.76
SREBF1-214ENST00000486311 CHRNEQ04844 493 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms