RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 PRRG4Q9BZD6 226 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 IKZF5Q9H5V7 419 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 TMEM38AQ9H6F2 299 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 DNAJB12Q9NXW2 375 aaKnown RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF443Q9Y2A4 671 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ARHGAP21Q5T5U3 1957 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 HEATR5AQ86XA9 2040 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 A0A0J9YW62 118 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CFAP73A6NFT4 308 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 TNFSF11O14788 317 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 MRASO14807 208 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 EFNA2O43921 213 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CXCL13O43927 109 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CRHP06850 196 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 FCGR2AP12318 317 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 FKBP2P26885 142 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 SLC7A1P30825 629 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 SFTPDP35247 375 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 APOBEC1P41238 236 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 HTR3AP46098 478 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 IDH2P48735 452 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 AGFG1P52594 562 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 DLX5P56178 289 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 MTPNP58546 118 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CAPRIN1Q14444 709 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 PON3Q15166 354 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ADRM1Q16186 407 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CYP51A1Q16850 503 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CTU2Q2VPK5 515 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF311Q5JNZ3 666 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 RNF220Q5VTB9 566 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 PLEKHM3Q6ZWE6 761 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF550Q7Z398 422 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 GRINAQ7Z429 371 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 C10orf111Q8N326 155 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 C11orf65Q8NCR3 313 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CCDC197Q8NCU1 140 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 FIG4Q92562 907 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 LRRC58Q96CX6 371 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF845Q96IR2 970 aaPredicted RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ADGRG7Q96K78 797 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF607Q96SK3 696 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 SPATA5L1Q9BVQ7 753 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 GID8Q9NWU2 228 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 MCTS1Q9ULC4 181 aaKnown RBP11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CRYBG3Q68DQ2 2970 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 PKDREJQ9NTG1 2253 aa11.18□□□□□ -0.62
HMG20B-211ENST00000486028 CELSR2Q9HCU4 2923 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 ADGRG4Q8IZF6 3080 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SYT5O00445 386 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 FAAHO00519 579 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 AP3D1O14617 1153 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SERPINB7O75635 380 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 PABPC4LP0CB38 370 aaKnown RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SHC1P29353 583 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 PLAURQ03405 335 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 TFF3Q07654 80 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 RBBP4Q09028 425 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 FOXF2Q12947 444 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SCARB2Q14108 478 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 REP15Q6BDI9 236 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 GTF2IRD2BQ6EKJ0 949 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 NANOGP8Q6NSW7 305 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 PPP4R4Q6NUP7 873 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 C3orf33Q6P1S2 294 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 GTF2IRD2Q86UP8 949 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SLC30A8Q8IWU4 369 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 CLIP4Q8N3C7 705 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 RELL2Q8NC24 303 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 HIPK4Q8NE63 616 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 RP9Q8TA86 221 aaKnown RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 REXO5Q96IC2 774 aaKnown RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 PIGMQ9H3S5 423 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 KAT8Q9H7Z6 458 aaKnown RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 NANOGQ9H9S0 305 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 ANGPT4Q9Y264 503 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 SPIN1Q9Y657 262 aaPredicted RBP11.17□□□□□ -0.62
HMG20B-211ENST00000486028 NOTCH2Q04721 2471 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 DOCK7Q96N67 2140 aa11.17□□□□□ -0.62
HMG20B-211ENST00000486028 INTS1Q8N201 2190 aaKnown RBP11.16□□□□□ -0.62
HMG20B-211ENST00000486028 A0A1W2PNV4 684 aa11.16□□□□□ -0.62
HMG20B-211ENST00000486028 PRORSD1PA6NEY8 169 aa11.16□□□□□ -0.62
HMG20B-211ENST00000486028 EEF1E1-BLOC1S5C9J1V9 151 aa11.16□□□□□ -0.62
HMG20B-211ENST00000486028 EEF1E1O43324 174 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms