RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 VLDLRP98155 873 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 NRF1Q16656 503 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 C1orf185Q5T7R7 199 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 FNDC7Q5VTL7 733 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 HMBOX1Q6NT76 420 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ZNF585AQ6P3V2 769 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ZNF836Q6ZNA1 936 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ZAR1Q86SH2 424 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 CARM1Q86X55 608 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 OR1J4Q8NGS1 313 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 SLC35B4Q969S0 331 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ZG16BQ96DA0 208 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 CENPNQ96H22 339 aaPredicted RBP15.44■□□□□ 0.06
VIM-205ENST00000485947 ZNF347Q96SE7 839 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ARHGDIGQ99819 225 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 UBQLN4Q9NRR5 601 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 SH3GLB1Q9Y371 365 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 ENPP4Q9Y6X5 453 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 NINQ8N4C6 2090 aa15.44■□□□□ 0.06
VIM-205ENST00000485947 SNPHO15079 494 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 PRSS23O95084 383 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 ENDOUP21128 410 aaKnown RBP15.43■□□□□ 0.06
VIM-205ENST00000485947 NUP107P57740 925 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 FGFBP1Q14512 234 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 MAPK14Q16539 360 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 IQCCQ4KMZ1 466 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 RIPPLY2Q5TAB7 128 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 VASNQ6EMK4 673 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 GRAMD2AQ8IUY3 354 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 OR5M9Q8NGP3 310 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 EFHD2Q96C19 240 aaPredicted RBP15.43■□□□□ 0.06
VIM-205ENST00000485947 ZNF300Q96RE9 604 aaPredicted RBP15.43■□□□□ 0.06
VIM-205ENST00000485947 OSBPL11Q9BXB4 747 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 RSPO3Q9BXY4 272 aaPredicted RBP15.43■□□□□ 0.06
VIM-205ENST00000485947 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 HHATLQ9HCP6 504 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 SPRR3Q9UBC9 169 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 KCNE5Q9UJ90 142 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 MRPS18CQ9Y3D5 142 aaKnown RBP15.43■□□□□ 0.06
VIM-205ENST00000485947 FAM215AQ9Y5M1 114 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 CELSR1Q9NYQ6 3014 aa15.43■□□□□ 0.06
VIM-205ENST00000485947 APCP25054 2843 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 NPIPA5A0A0B4J1W7 369 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 A0A1W2PQD3 144 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PRAMEF25A6NGN4 478 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 HSPB2A8KAH6 182 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 NPIPA7E9PJI5 369 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 hCG_2039718K7EN88 272 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 ICOSLGO75144 302 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 UGT2B11O75310 529 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 TRAPPC6AO75865 159 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 UTS2O95399 124 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 EPPINO95925 133 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 ACTL6AO96019 429 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 MT-ND1P03886 318 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 NPIPA8P0DM63 369 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 GLI4P10075 376 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 RHCEP18577 417 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 TBXA2RP21731 343 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 ADH7P40394 386 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PEX19P40855 299 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 CRYZQ08257 329 aaKnown RBP15.42■□□□□ 0.06
VIM-205ENST00000485947 GK3PQ14409 553 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 CDSNQ15517 529 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 TRIP10Q15642 601 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 HSPB2Q16082 182 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 SLC25A35Q3KQZ1 300 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PDZK1Q5T2W1 519 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 RTL6Q6ICC9 239 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 OR2T5Q6IEZ7 315 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 NCCRP1Q6ZVX7 275 aaPredicted RBP15.42■□□□□ 0.06
VIM-205ENST00000485947 AMIGO2Q86SJ2 522 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 CYP4Z1Q86W10 505 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PRR22Q8IZ63 422 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 OR2T29Q8NH02 315 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 RNF138Q8WVD3 245 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 GNRHR2Q96P88 292 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 AMBRA1Q9C0C7 1298 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PRDM14Q9GZV8 571 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 SLC6A15Q9H2J7 730 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 KLRF1Q9NZS2 232 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 NDUFAF4Q9P032 175 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 ABCG2Q9UNQ0 655 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 SLC35A3Q9Y2D2 325 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 FAM32AQ9Y421 112 aaKnown RBP15.42■□□□□ 0.06
VIM-205ENST00000485947 DTNAQ9Y4J8 743 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 EML6Q6ZMW3 1958 aa15.42■□□□□ 0.06
VIM-205ENST00000485947 PKDREJQ9NTG1 2253 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 CENPVL1A0A0U1RR11 272 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 CDHR4A6H8M9 788 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 SCDO00767 359 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 GNGT2O14610 69 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 ADAMDEC1O15204 470 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 TOXO94900 526 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 OXSR1O95747 527 aaPredicted RBP15.41■□□□□ 0.06
VIM-205ENST00000485947 CYP4B1P13584 511 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 HPGDP15428 266 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 IGFBP2P18065 325 aa15.41■□□□□ 0.06
VIM-205ENST00000485947 TNFRSF1BP20333 461 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms