RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ITGA2P17301 1181 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CD247P20963 164 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TCEA1P23193 301 aaKnown RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 KCNJ5P48544 419 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 GZMMP51124 257 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SELENOWP63302 87 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SLC25A3Q00325 362 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SRYQ05066 204 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CRYZQ08257 329 aaKnown RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 EPS8Q12929 822 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 HSPB2Q16082 182 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TMEM44Q2T9K0 475 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ELOA3BQ3SY89 546 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LRRC23Q53EV4 343 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CYBRD1Q53TN4 286 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 MTX3Q5HYI7 312 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 GLYATQ6IB77 296 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ULK3Q6PHR2 472 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CCDC121Q6ZUS5 278 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 PLEKHM3Q6ZWE6 761 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 OLIG3Q7RTU3 272 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CD163Q86VB7 1156 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 DOLPP1Q86YN1 238 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LACC1Q8IV20 430 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CLIP4Q8N3C7 705 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LSMEM1Q8N8F7 131 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SMYD1Q8NB12 490 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 RBM15BQ8NDT2 890 aaKnown RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ELOA3Q8NG57 546 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SMPDL3BQ92485 455 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 RND1Q92730 232 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 SLC47A1Q96FL8 570 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TPD52L3Q96J77 140 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 LRGUKQ96M69 825 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 ZFP3Q96NJ6 502 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 EPYCQ99645 322 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 BTBD10Q9BSF8 475 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TRIM8Q9BZR9 551 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 MMADHCQ9H3L0 296 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-208ENST00000485618 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 C12orf10Q9HB07 376 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 GLRX2Q9NS18 164 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 PNPLA3Q9NST1 481 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 RLIMQ9NVW2 624 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 CHRNA9Q9UGM1 479 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 MEMO1Q9Y316 297 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
SF3A1-208ENST00000485618 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 HTR3EA5X5Y0 456 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 CD8B2A6NJW9 211 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 CLDN24A6NM45 220 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 A8MVM7 634 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 EIF1AYO14602 144 aaKnown RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ADAM10O14672 748 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ADAMDEC1O15204 470 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SEC14L5O43304 696 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 DNPH1O43598 174 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 OR2T1O43869 369 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 UBOX5O94941 541 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 EPPINO95925 133 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF708P17019 499 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 GGT1P19440 569 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 AGAP20933 346 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 LHX2P50458 406 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 RNF144AP50876 292 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 DLX5P56178 289 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SMIM11AP58511 58 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 B3GALT5-AS1P59052 145 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 CBX1P83916 185 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 HSF1Q00613 529 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 DMTNQ08495 405 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 FOXF1Q12946 379 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 MFSD13AQ14CX5 517 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 C3AR1Q16581 482 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 NDUFAF6Q330K2 333 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TMEM176BQ3YBM2 270 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 NSUN5P2Q63ZY6 315 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 HBMQ6B0K9 141 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF613Q6PF04 617 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 XKRXQ6PP77 449 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 HMGN2P46Q86SG4 172 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 DHFR2Q86XF0 187 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 MCEMP1Q8IX19 187 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 C10orf67Q8IYJ2 551 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ULK2Q8IYT8 1036 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 UBQLNLQ8IYU4 475 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 SLC43A2Q8N370 569 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ATP6V1C2Q8NEY4 427 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 OR10Q1Q8NGQ4 319 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 OR2V1Q8NHB1 315 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 PHF10Q8WUB8 498 aaKnown RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 ASB5Q8WWX0 329 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 GEMIN6Q8WXD5 167 aaKnown RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 OSTF1Q92882 214 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 WNT2BQ93097 391 aa7.46□□□□□ -1.22
SF3A1-208ENST00000485618 CPNE4Q96A23 557 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-208ENST00000485618 TAMM41Q96BW9 452 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms