RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 MCHR1Q99705 422 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 CTPS2Q9NRF8 586 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 SERINC1Q9NRX5 453 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 OSGIN1Q9UJX0 560 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 OSGIN2Q9Y236 505 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 ARHGAP21Q5T5U3 1957 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 FIGNL2A6NMB9 653 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 WDR1O75083 606 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 ATP6V1B2P21281 511 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 CA7P43166 264 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 CASP6P55212 293 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 C3AR1Q16581 482 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 IFI44LQ53G44 452 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 MTX3Q5HYI7 312 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 LCN8Q6JVE9 175 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 GGNQ86UU5 652 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 DOLPP1Q86YN1 238 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 RBM45Q8IUH3 476 aaKnown RBP17.95■□□□□ 0.46
COL6A2-208ENST00000485591 ULK2Q8IYT8 1036 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 LILRA2Q8N149 483 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 MEIOBQ8N635 442 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 SLC25A43Q8WUT9 341 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-208ENST00000485591 GEMIN6Q8WXD5 167 aaKnown RBP17.95■□□□□ 0.46
COL6A2-208ENST00000485591 SMPDL3BQ92485 455 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 MCUR1Q96AQ8 359 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 C3orf49Q96BT1 292 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 TP63Q9H3D4 680 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-208ENST00000485591 TMEM185BQ9H7F4 350 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 RPS6KB2Q9UBS0 482 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 CHRNA9Q9UGM1 479 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 TINAGQ9UJW2 476 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 CAMK2AQ9UQM7 478 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 SPIN1Q9Y657 262 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-208ENST00000485591 KIAA1549Q9HCM3 1950 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 ESPL1Q14674 2120 aa17.95■□□□□ 0.46
COL6A2-208ENST00000485591 TMED7-TICAM2A0A0A6YYA0 188 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 A0A1B0GWA3 101 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 GJE1A6NN92 205 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 H0Y3Z8 333 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 GABRA1P14867 456 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 PTGER4P35408 488 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 OR1E2P47887 323 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 MAP2K6P52564 334 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 CLDN20P56880 219 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 MS4A2Q01362 244 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 KCNC4Q03721 635 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 OR1Q1Q15612 314 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 POMZP3Q6PJE2 187 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 DHFR2Q86XF0 187 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 ADGRG3Q86Y34 549 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 UBQLNLQ8IYU4 475 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 PHF10Q8WUB8 498 aaKnown RBP17.94■□□□□ 0.46
COL6A2-208ENST00000485591 DNAJA4Q8WW22 397 aaPredicted RBP17.94■□□□□ 0.46
COL6A2-208ENST00000485591 PRR14Q9BWN1 585 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 MMADHCQ9H3L0 296 aaPredicted RBP17.94■□□□□ 0.46
COL6A2-208ENST00000485591 C12orf10Q9HB07 376 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 TMEM27Q9HBJ8 222 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 TMED7Q9Y3B3 224 aa17.94■□□□□ 0.46
COL6A2-208ENST00000485591 POLEQ07864 2286 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 PHF3Q92576 2039 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 A0A0B4J2E0 115 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 TRGV8A0A0C4DH27 118 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 A0A1B0GX12 115 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 AHRRA9YTQ3 701 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ACOT8O14734 319 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 SEC14L5O43304 696 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 FKBP2P26885 142 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 SHC1P29353 583 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 SUCLG1P53597 346 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 CLDN15P56746 228 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 SRYQ05066 204 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 TRAP1Q12931 704 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 EIF2S3LQ2VIR3 472 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 CTU2Q2VPK5 515 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ENTPD8Q5MY95 495 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 SWT1Q5T5J6 900 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ZNF585AQ6P3V2 769 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ZNF613Q6PF04 617 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ULK3Q6PHR2 472 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 CYP2R1Q6VVX0 501 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ESPNLQ6ZVH7 1005 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 FKBP9P1Q75LS8 142 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ASRGL1Q7L266 308 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ATG4DQ86TL0 474 aaPredicted RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 FAM86B1Q8N7N1 296 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ZPLD1Q8TCW7 415 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 ADGRG7Q96K78 797 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 KLHL15Q96M94 604 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 POLR2J2Q9GZM3 115 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 POLR2J3Q9H1A7 115 aaKnown RBP17.93■□□□□ 0.46
COL6A2-208ENST00000485591 NBASA2RRP1 2371 aa17.93■□□□□ 0.46
COL6A2-208ENST00000485591 MPDZO75970 2070 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 J3QKU1 62 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 ADAMDEC1O15204 470 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 ZNF208O43345 1280 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 PRKD3O94806 890 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 STAMBPO95630 424 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 IFNW1P05000 195 aa17.92■□□□□ 0.46
COL6A2-208ENST00000485591 HOXD4P09016 255 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-208ENST00000485591 CXCR1P25024 350 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms