RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	ETV4	P43268	484 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	SLC1A6	P48664	564 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	KHK	P50053	298 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	RPL14	P50914	215 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	ANXA11	P50995	505 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	CLNS1A	P54105	237 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	KRTAP1-1	Q07627	177 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF844	Q08AG5	666 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	VEZF1	Q14119	521 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	LAPTM4A	Q15012	233 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	DPY19L1	Q2PZI1	675 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	SLC25A53	Q5H9E4	307 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	ANKRD46	Q86W74	232 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	UBE2J2	Q8N2K1	259 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	OR8J2	Q8NGG1	315 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	RAB3IL1	Q8TBN0	382 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	AEN	Q8WTP8	325 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	PAIP2	Q9BPZ3	127 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	PSD2	Q9BQI7	771 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	TMEM204	Q9BSN7	226 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	QRSL1	Q9H0R6	528 aa	Known RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	ALG2	Q9H553	416 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	AKTIP	Q9H8T0	292 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	KCNK9	Q9NPC2	374 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	POLE3	Q9NRF9	147 aa		11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.76	□□□□□ -0.53
UBA3-210	ENST00000485424	PRSS51	A0A1B0GVH4	220 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424		C9JVG2	144 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ANKRD28	O15084	1053 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	FCMR	O60667	390 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	CYTIP	O60759	359 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	UGT2B17	O75795	530 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	LYZL6	O75951	148 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	LBP	P18428	481 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	S100A3	P33764	101 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	RYK	P34925	604 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	APOBEC1	P41238	236 aa	Known RBP	11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	OR3A2	P47893	321 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	DIO1	P49895	249 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	SESN3	P58005	492 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	SKP2	Q13309	424 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	PPA1	Q15181	289 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	TAB1	Q15750	504 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	SYT14P1	Q58G82	188 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	NCMAP	Q5T1S8	102 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	WDR93	Q6P2C0	686 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424		Q6ZT83	130 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	SSX8	Q7RTT4	187 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	GALNT5	Q7Z7M9	940 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ARFGAP2	Q8N6H7	521 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	TRIML2	Q8N7C3	387 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	OIT3	Q8WWZ8	545 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF775	Q96BV0	537 aa	Predicted RBP	11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ROPN1L	Q96C74	230 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF300	Q96RE9	604 aa	Predicted RBP	11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	SLC35A5	Q9BS91	424 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	TMEM109	Q9BVC6	243 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF350	Q9GZX5	532 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	BCO1	Q9HAY6	547 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	ACER3	Q9NUN7	267 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	MARCO	Q9UEW3	520 aa	Predicted RBP	11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	PRSS50	Q9UI38	385 aa		11.75	□□□□□ -0.53
UBA3-210	ENST00000485424	CIB4	A0PJX0	185 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	SMAD9	O15198	467 aa	Known RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	KIAA0513	O60268	411 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	FKBP2	P26885	142 aa	Known RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	IDUA	P35475	653 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	STX3	Q13277	289 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	TNK1	Q13470	666 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	ETFDH	Q16134	617 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	ADAM5	Q6NVV9	412 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	TMPPE	Q6ZT21	453 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	SPATA3	Q8NHX4	192 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	MIPOL1	Q8TD10	442 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	SMAP2	Q8WU79	429 aa	Predicted RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	RAB8B	Q92930	207 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	TESC	Q96BS2	214 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	REPIN1	Q9BWE0	567 aa	Known RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	NUF2	Q9BZD4	464 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	SERHL2	Q9H4I8	314 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	SSU72	Q9NP77	194 aa	Known RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	FAIM	Q9NVQ4	179 aa		11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	NOSIP	Q9Y314	301 aa	Known RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424		V9GYY5	206 aa	Predicted RBP	11.74	□□□□□ -0.53
UBA3-210	ENST00000485424	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	2e-6	■□□□□ 10.2
UBA3-210	ENST00000485424	CCT8L1P	A6NM43	557 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF724	A8MTY0	619 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	ESPN	B1AK53	854 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	ZNF814	B7Z6K7	855 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424		E9PBE3	544 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	CRLF1	O75462	422 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	H6PD	O95479	791 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	UQCRB	P14927	111 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	GGT1	P19440	569 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	PGM1	P36871	562 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	BSPH1	Q075Z2	132 aa		11.73	□□□□□ -0.53
UBA3-210	ENST00000485424	FAP	Q12884	760 aa		11.73	□□□□□ -0.53

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