RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CASP8Q14790 479 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 DPY19L1Q2PZI1 675 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 TYW3Q6IPR3 259 aaKnown RBP10.14□□□□□ -0.79
SCFD1-206ENST00000484733 PRIMA1Q86XR5 153 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF619Q8N2I2 560 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 VPS37AQ8NEZ2 397 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 NEURL3Q96EH8 262 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF300Q96RE9 604 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-206ENST00000484733 TRIM2Q9C040 744 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 HDGFL3Q9Y3E1 203 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 NAV3Q8IVL0 2385 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 ABCA2Q9BZC7 2435 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 SULT2B1O00204 365 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 SOD3P08294 240 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 OR12D1P0DN82 309 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 IGHV1-2P23083 117 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 RPL14P50914 215 aaKnown RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 PPP2R2BQ00005 443 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 BSPH1Q075Z2 132 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 PPA1Q15181 289 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CHI3L2Q15782 390 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 PDCD2Q16342 344 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 MAPK14Q16539 360 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CLEC12BQ2HXU8 276 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 SYT14P1Q58G82 188 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 ROPN1LQ96C74 230 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 TRAF4Q9BUZ4 470 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CCDC106Q9BWC9 280 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 EMC3Q9P0I2 261 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 BTNL2Q9UIR0 455 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 WDR45Q9Y484 360 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 FREM1Q5H8C1 2179 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 TM9SF1O15321 606 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CLOCKO15516 846 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CYP7B1O75881 506 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 UBTFL6P0CB48 400 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 PCSK6P29122 969 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 KHKP50053 298 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 SLC16A1P53985 500 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 KRTAP1-1Q07627 177 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 FUT5Q11128 374 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 C1QTNF12Q5T7M4 302 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 FRRS1Q6ZNA5 592 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 DNM1P46Q6ZS02 220 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 GRINAQ7Z429 371 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 DTX2Q86UW9 622 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 CMIPQ8IY22 773 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF100Q8IYN0 542 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF433Q8N7K0 673 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 MUCL1Q96DR8 90 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 ZHX1-C8orf76Q96EF9 292 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 RADILQ96JH8 1075 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 PKNOX2Q96KN3 472 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 SORT1Q99523 831 aa10.13□□□□□ -0.79
SCFD1-206ENST00000484733 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-206ENST00000484733 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
SCFD1-206ENST00000484733 ZNF716A6NP11 495 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 GPR171O14626 319 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 CPSF4O95639 269 aaKnown RBP10.12□□□□□ -0.79
SCFD1-206ENST00000484733 LBPP18428 481 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 GGT1P19440 569 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 PGGHGQ32M88 737 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 OGFOD2Q6N063 350 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 ALKBH2Q6NS38 261 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 OLIG3Q7RTU3 272 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 KBTBD8Q8NFY9 601 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 PIGXQ8TBF5 258 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 XAGE5Q8WWM1 108 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 PMM1Q92871 262 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 NEUROG1Q92886 237 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 CCDC115Q96NT0 180 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 C20orf27Q9GZN8 174 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 BARX1Q9HBU1 254 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-206ENST00000484733 CTPS2Q9NRF8 586 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 CHRNA9Q9UGM1 479 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 MGAT4BQ9UQ53 548 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 TRAPPC4Q9Y296 219 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-206ENST00000484733 A0A1W2PP18 115 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 OR5H1A6NKK0 313 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 SHISA9B4DS77 424 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 INAFM1C9JVW0 142 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 FAAHO00519 579 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 LYZL6O75951 148 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 CD8AP01732 235 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 EDNRAP25101 427 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 HTR3AP46098 478 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 SLC1A6P48664 564 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 KCNJ10P78508 379 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 TNFAIP8L3Q5GJ75 292 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 FBXW9Q5XUX1 488 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 ADGRG3Q86Y34 549 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 ARFGAP2Q8N6H7 521 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 MEAF6Q9HAF1 191 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 LIPT1Q9Y234 373 aa10.12□□□□□ -0.79
SCFD1-206ENST00000484733 PRR14LQ5THK1 2151 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms