RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 STACQ99469 402 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 FMO2Q99518 471 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 INPP5KQ9BT40 448 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 QRSL1Q9H0R6 528 aaKnown RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 GRPEL1Q9HAV7 217 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 DUSP22Q9NRW4 184 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 SIRT3Q9NTG7 399 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ZCCHC3Q9NUD5 404 aaKnown RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ATP23Q9Y6H3 246 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 PMF1-BGLAPU3KQ54 211 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 NPIPB9F8W1W9 429 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 H3BQF6 201 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 SULT2B1O00204 365 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF264O43296 627 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 KIAA0513O60268 411 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CYP7B1O75881 506 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 TGFAP01135 160 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 LINC00032P0C843 101 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 PRPH2P23942 346 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 APOBEC3AP31941 199 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 NTF4P34130 210 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CCT3P49368 545 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 PDLIM4P50479 330 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FOXG1P55316 489 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 SESN3P58005 492 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 RPL38P63173 70 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 RUNX1T1Q06455 604 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 PDE7AQ13946 482 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CBFBQ13951 182 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 GABRA6Q16445 453 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CARTPTQ16568 116 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 DCST2Q5T1A1 773 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 DMRTA1Q5VZB9 504 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ZYG11AQ6WRX3 759 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FRMD7Q6ZUT3 714 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 MTDHQ86UE4 582 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 C17orf53Q8N3J3 647 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 WDR31Q8NA23 367 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 TOR1AIP2Q8NFQ8 470 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 OR7A2PQ8NGA2 310 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 OR2T11Q8NH01 316 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ACMSDQ8TDX5 336 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ADAMTS15Q8TE58 950 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 APH1AQ96BI3 265 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CCDC126Q96EE4 140 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FBXO17Q96EF6 278 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FCRL1Q96LA6 429 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 MUS81Q96NY9 551 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FOXN4Q96NZ1 517 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 CCT7Q99832 543 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 THUMPD3Q9BV44 507 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ACTRT3Q9BYD9 372 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 EML4Q9HC35 981 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 MED4Q9NPJ6 270 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 SERINC1Q9NRX5 453 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 ASB6Q9NWX5 421 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 EMC3Q9P0I2 261 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 DCDC2Q9UHG0 476 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 EMCNQ9ULC0 261 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FAF1Q9UNN5 650 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 NOSIPQ9Y314 301 aaKnown RBP6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FIS1Q9Y3D6 152 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
CSDE1-206ENST00000483030 FREM1Q5H8C1 2179 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 IGKV3D-15A0A087WSY6 115 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 IGHV4-61A0A0C4DH41 118 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 A0A1W2PPM1 405 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 SERINC4A6NH21 518 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF716A6NP11 495 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 VWC2LB2RUY7 222 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 ETV2O00321 342 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 EIF4E2O60573 245 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 MRPL33O75394 65 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 ITGA5P08648 1049 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 TFPIP10646 304 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 LAMP1P11279 417 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 UBL4AP11441 157 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 BCKDHAP12694 445 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 APEHP13798 732 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 HNF1AP20823 631 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 ECHS1P30084 290 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 NR4A2P43354 598 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 DNAJB13P59910 316 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 NAA20P61599 178 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 CSNK2A1P68400 391 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 CKAP4Q07065 602 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 MERTKQ12866 999 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 TP53BP2Q13625 1128 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 SQLEQ14534 574 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 MLC1Q15049 377 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 PDK3Q15120 406 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 MST1LQ2TV78 715 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 SPDYE7PQ495Y7 208 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 GALNTL6Q49A17 601 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 IQCCQ4KMZ1 466 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 PDZK1Q5T2W1 519 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 OR7E24Q6IFN5 339 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms