RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 IL17RDQ8NFM7 739 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 OR52P1PQ8NH57 321 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SLC26A7Q8TE54 656 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 GRHL3Q8TE85 626 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CACYBPQ9HB71 228 aaKnown RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 SH2D2AQ9NP31 389 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SACM1LQ9NTJ5 587 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 KLRF1Q9NZS2 232 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CNIH4Q9P003 139 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 TP53TG5Q9Y2B4 290 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CSAG2Q9Y5P2 127 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CACNA1GO43497 2377 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CFAP47Q6ZTR5 3102 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 NPIPB9F8W1W9 429 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 FADS1O60427 444 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 DBIP07108 87 aaKnown RBP10.59□□□□□ -0.71
HPS4-212ENST00000481910 NGFRP08138 427 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 PRKCAP17252 672 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 KDELR2P33947 212 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 CASP3P42574 277 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 TNFSF10P50591 281 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 BNIP2Q12982 314 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 MAPK14Q16539 360 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 KLHL26Q53HC5 615 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 ZNF311Q5JNZ3 666 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 BICRALQ6AI39 1079 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 APOOLQ6UXV4 268 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 ASB18Q6ZVZ8 466 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 MARCH3Q86UD3 253 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 PTRH1Q86Y79 214 aaKnown RBP10.59□□□□□ -0.71
HPS4-212ENST00000481910 POGLUT1Q8NBL1 392 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 MDS2Q8NDY4 140 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 C5orf34Q96MH7 638 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 SPATA5L1Q9BVQ7 753 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 GALNT9Q9HCQ5 603 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 KLHL1Q9NR64 748 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 SUCOQ9UBS9 1254 aaKnown RBP10.59□□□□□ -0.71
HPS4-212ENST00000481910 SEC14L3Q9UDX4 400 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 TUBD1Q9UJT1 453 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 ABCG2Q9UNQ0 655 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 ERGIC3Q9Y282 383 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 DTNAQ9Y4J8 743 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 MGAQ8IWI9 3026 aa10.59□□□□□ -0.71
HPS4-212ENST00000481910 CENPVL1A0A0U1RR11 272 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 PRAMEF25A6NGN4 478 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 G3V3Y1 287 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 MFN2O95140 757 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 OPN1SWP03999 348 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SP1P08047 785 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 IDUAP35475 653 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 RNF144AP50876 292 aaPredicted RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 TSPAN5P62079 268 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 KCNJ10P78508 379 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 MS4A2Q01362 244 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SNTA1Q13424 505 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 GALNT5Q7Z7M9 940 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 COMTD1Q86VU5 262 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 VRK2Q86Y07 508 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ARMC8Q8IUR7 673 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ERI1Q8IV48 349 aaKnown RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 GATSQ8NAP1 163 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 C9orf43Q8TAL5 461 aaPredicted RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 BORCS5Q969J3 196 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 FAM162AQ96A26 154 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ASB9Q96DX5 294 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ZNF71Q9NQZ8 489 aaPredicted RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 MAGEL2Q9UJ55 1249 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 CNOT11Q9UKZ1 510 aaKnown RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 A0A0A6YYJ9 748 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 A0A1W2PQD3 144 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SERINC4A6NH21 518 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 H3BNH8 94 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ARPC2O15144 300 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 CLOCKO15516 846 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 DPM1O60762 260 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ANGPTL1O95841 491 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 CNR1P21554 472 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 RPS4Y1P22090 263 aaKnown RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 KCNJ2P63252 427 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ZNF766Q5HY98 468 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 TBCELQ5QJ74 424 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SLC30A6Q6NXT4 461 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 TMEM81Q6P7N7 255 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SHQ1Q6PI26 577 aaKnown RBP10.58□□□□□ -0.72
HPS4-212ENST00000481910 DHFR2Q86XF0 187 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 PHOSPHO1Q8TCT1 267 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 OIT3Q8WWZ8 545 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 DOHHQ9BU89 302 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 OSBPL11Q9BXB4 747 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ANGPTL4Q9BY76 406 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 HES7Q9BYE0 225 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 RTN4RQ9BZR6 473 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 GORASP2Q9H8Y8 452 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 ACTR3BQ9P1U1 418 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 SNX13Q9Y5W8 968 aa10.58□□□□□ -0.72
HPS4-212ENST00000481910 TRAV17A0A0B4J275 112 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms