RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MSRB1Q9NZV6 116 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 ADAM22Q9P0K1 906 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 FOXJ2Q9P0K8 574 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 MBD2Q9UBB5 411 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 UXTQ9UBK9 157 aaPredicted RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 NCKAP1Q9Y2A7 1128 aa2.9□□□□□ -1.95
SMC6-208ENST00000481708 TPRP12270 2363 aaKnown RBP2.9□□□□□ -1.95
SMC6-208ENST00000481708 LAMA5O15230 3695 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 FAT2Q9NYQ8 4349 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR5K3A6NET4 321 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR6C65A6NJZ3 312 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 AIREO43918 545 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 RAMP3O60896 148 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 LYNP07948 512 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 HOXA5P20719 270 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 GNPDA1P46926 289 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 XGP55808 180 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 RPS14P62263 151 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 HERVK_113P63132 956 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 GUCY2DQ02846 1103 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ITGB3BPQ13352 177 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 EIF4EBP2Q13542 120 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 RBM39Q14498 530 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 SOHLH1Q5JUK2 328 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 NCAPH2Q6IBW4 605 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 FUT10Q6P4F1 479 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 TMIGD1Q6UXZ0 262 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR52E5Q8NH55 327 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ZNF514Q96K75 400 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 OVOL2Q9BRP0 275 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ERVK-6Q9BXR3 956 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 LAT2Q9GZY6 243 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SLC25A51Q9H1U9 297 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ZNF703Q9H7S9 590 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 UCK1Q9HA47 277 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SLC25A19Q9HC21 320 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SLC2A8Q9NY64 477 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 STMN3Q9NZ72 180 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ADA2Q9NZK5 511 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 BCAP29Q9UHQ4 241 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR2W1Q9Y3N9 320 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 YIPF1Q9Y548 306 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 RELNP78509 3460 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ZDBF2Q9HCK1 2354 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 C5orf42Q9H799 3197 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 WDR87Q6ZQQ6 2873 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 A8MXQ7 604 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 E5RJQ4 531 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 STX7O15400 261 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 B4GAT1O43505 415 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 TRAPPC3O43617 180 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ADAP1O75689 374 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ERLIN2O94905 339 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 LGALS2P05162 132 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 KRT19P08727 400 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 FGF2P09038 288 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 HLA-DOBP13765 273 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 PSMB6P28072 239 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 TACR3P29371 465 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 P2RY1P47900 373 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 MRPS6P82932 125 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 C11orf63Q6NUN7 778 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 H2BFWTQ7Z2G1 175 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 MAP7D3Q8IWC1 876 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 TMEM99Q8N816 258 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR8J2Q8NGG1 315 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SH3GL1Q99961 368 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SLITRK6Q9H5Y7 841 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 APOBEC3GQ9HC16 384 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 PCDH9Q9HC56 1237 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SYBUQ9NX95 663 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 MRM2Q9UI43 246 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 SLC6A5Q9Y345 797 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 DNHD1Q96M86 4753 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 TRBV5-5A0A0J9YX44 114 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 C9JVG2 144 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 C1QTNF3-AMACRE9PGA6 284 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OAS1P00973 400 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 ALOX5P09917 674 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ENO3P13929 434 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 CASP14P31944 242 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 DUSP3P51452 185 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 C21orf59P57076 290 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR2B6P58173 313 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 KDSRQ06136 332 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 MEF2DQ14814 521 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 SPDYE7PQ495Y7 208 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 CDKL4Q5MAI5 379 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR4A47Q6IF82 309 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 GOLGA7Q7Z5G4 137 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 ABHD12BQ7Z5M8 362 aaPredicted RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 PELI3Q8N2H9 469 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR7G1Q8NGA0 311 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR4F17Q8NGA8 305 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR4F5Q8NH21 305 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 KIFAP3Q92845 792 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR4F4Q96R69 305 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 OR2B2Q9GZK3 357 aa2.89□□□□□ -1.95
SMC6-208ENST00000481708 IQCGQ9H095 443 aaKnown RBP2.89□□□□□ -1.95
SMC6-208ENST00000481708 CSNK1G1Q9HCP0 422 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms