RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PRKCAP17252 672 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 CBLP22681 906 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 RBM34P42696 430 aaKnown RBP15.96■□□□□ 0.15
UPF3A-206ENST00000480362 UGT2B15P54855 530 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 GRINAQ7Z429 371 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 ZER1Q7Z7L7 766 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 SULF2Q8IWU5 870 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 RNF113BQ8IZP6 322 aaKnown RBP15.96■□□□□ 0.15
UPF3A-206ENST00000480362 PIGXQ8TBF5 258 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 GTPBP3Q969Y2 492 aaKnown RBP15.96■□□□□ 0.15
UPF3A-206ENST00000480362 C1GALT1C1Q96EU7 318 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 ZNF597Q96LX8 424 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 SMAD5Q99717 465 aaKnown RBP15.96■□□□□ 0.15
UPF3A-206ENST00000480362 NIPSNAP1Q9BPW8 284 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 C12orf10Q9HB07 376 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 KLHL1Q9NR64 748 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 TMEFF2Q9UIK5 374 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-206ENST00000480362 OSGIN1Q9UJX0 560 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 MGAT4BQ9UQ53 548 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 VDAC3Q9Y277 283 aa15.96■□□□□ 0.15
UPF3A-206ENST00000480362 PINLYPA6NC86 204 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 TAF4O00268 1085 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 DLGAP1O14490 977 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 PIP5K1CO60331 668 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 MITFO75030 526 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-206ENST00000480362 CCNA2P20248 432 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 IGFBP5P24593 272 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 CXCR1P25024 350 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 IFNGR2P38484 337 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 HTR3AP46098 478 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 TNFSF10P50591 281 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 POLR2HP52434 150 aaKnown RBP15.95■□□□□ 0.14
UPF3A-206ENST00000480362 UCNP55089 124 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 TMPRSS3P57727 454 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 IL1RL1Q01638 556 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 MERTKQ12866 999 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 PLPPR5Q32ZL2 321 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 C1orf94Q6P1W5 598 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 POMZP3Q6PJE2 187 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 UNQ6494/PRO21346Q6UXR6 183 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 GALNT5Q7Z7M9 940 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 P3H2Q8IVL5 708 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 NRMQ8IXM6 262 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 OR2M7Q8NG81 312 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 PFN4Q8NHR9 129 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 GNPDA2Q8TDQ7 276 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 C5orf34Q96MH7 638 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 ZNF184Q99676 751 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-206ENST00000480362 NPAS1Q99742 590 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 ZNF426Q9BUY5 554 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 ZNF556Q9HAH1 456 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 KRT84Q9NSB2 600 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 SMPD3Q9NY59 655 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-206ENST00000480362 KLF13Q9Y2Y9 288 aaPredicted RBP15.95■□□□□ 0.14
UPF3A-206ENST00000480362 MED31Q9Y3C7 131 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 ORC6Q9Y5N6 252 aa15.95■□□□□ 0.14
UPF3A-206ENST00000480362 TMED7-TICAM2A0A0A6YYA0 188 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 LRRC3CA6NJW4 275 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 ETV2O00321 342 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 KPNA4O00629 521 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 NME2P1O60361 137 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 SNAP29O95721 258 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 NME2P22392 152 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 DPP4P27487 766 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 OMPP47874 163 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 DLX5P56178 289 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 DSCR4P56555 118 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 PRKCDQ05655 676 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 FOXO1Q12778 655 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 FOXF1Q12946 379 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 ZIK1Q3SY52 487 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 SLC25A53Q5H9E4 307 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 ZNF766Q5HY98 468 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 GALNTL5Q7Z4T8 443 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 MEX3DQ86XN8 651 aaKnown RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 ADGRG3Q86Y34 549 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 POC1BQ8TC44 478 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 DNAJC9Q8WXX5 260 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 FAM46AQ96IP4 442 aaKnown RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 DGCR6LQ9BY27 220 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 UCK2Q9BZX2 261 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 ZFP64Q9NPA5 681 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 KRCC1Q9NPI7 259 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 MEPEQ9NQ76 525 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 BOKQ9UMX3 212 aaPredicted RBP15.94■□□□□ 0.14
UPF3A-206ENST00000480362 TMED7Q9Y3B3 224 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 PCDHGB6Q9Y5F9 930 aa15.94■□□□□ 0.14
UPF3A-206ENST00000480362 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 IGKV1D-42A0A075B6H8 117 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 A0A087WV48 116 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 A0A087WZY1 265 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 TMEM72A0PK05 275 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 SHISA8B8ZZ34 492 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 KLRC4-KLRK1H3BQV0 150 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 ADAP00813 363 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 RFPL3SP0C7P2 107 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 IFI30P13284 250 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 HK1P19367 917 aa15.93■□□□□ 0.14
UPF3A-206ENST00000480362 TCEA1P23193 301 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms