RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 POLR2HP52434 150 aaKnown RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 SUCLG1P53597 346 aaKnown RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 RPS3AP61247 264 aaKnown RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 SRYQ05066 204 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 CTU2Q2VPK5 515 aaKnown RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 CYBRD1Q53TN4 286 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 NSUN5P2Q63ZY6 315 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 C3P1Q6ZMU1 363 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 RANBP3LQ86VV4 465 aaPredicted RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 LACC1Q8IV20 430 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 UBQLNLQ8IYU4 475 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 FIG4Q92562 907 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 ADGRG7Q96K78 797 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 KLHL15Q96M94 604 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 TUBA1CQ9BQE3 449 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 ZNF559Q9BR84 538 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 TRIM2Q9C040 744 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 CALHM2Q9HA72 323 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 CTPS2Q9NRF8 586 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 ALKBH4Q9NXW9 302 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 TAS2R1Q9NYW7 299 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 CHRNA9Q9UGM1 479 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 PRPF19Q9UMS4 504 aaKnown RBP17.77■□□□□ 0.44
LIME1-205ENST00000480139 TMEM229AB2RXF0 380 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 SEC14L5O43304 696 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 TACR3P29371 465 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 NCALDP61601 193 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 SRSF1Q07955 248 aaKnown RBP eCLIP17.76■□□□□ 0.433e-6■□□□□ 9.6
LIME1-205ENST00000480139 C6orf89Q6UWU4 347 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 ADGRG3Q86Y34 549 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 RNF148Q8N7C7 305 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 SMPDL3BQ92485 455 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 PROX1Q92786 737 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 CCDC120Q96HB5 630 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 TTYH2Q9BSA4 534 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 C12orf10Q9HB07 376 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 ADPRHL2Q9NX46 363 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 MAGEL2Q9UJ55 1249 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 OSGIN1Q9UJX0 560 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 SLC9A8Q9Y2E8 581 aa17.76■□□□□ 0.43
LIME1-205ENST00000480139 NCOA6Q14686 2063 aaPredicted RBP17.76■□□□□ 0.43
LIME1-205ENST00000480139 USP9XQ93008 2570 aaPredicted RBP17.75■□□□□ 0.43
LIME1-205ENST00000480139 WIPF3A6NGB9 483 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CLCA1A8K7I4 914 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 EIF1AYO14602 144 aaKnown RBP17.75■□□□□ 0.43
LIME1-205ENST00000480139 ZNF208O43345 1280 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 HTR2AP28223 471 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CLK1P49759 484 aaKnown RBP17.75■□□□□ 0.43
LIME1-205ENST00000480139 SELENOWP63302 87 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 BNIP1Q12981 228 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CEACAM7Q14002 265 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 PDSS1Q5T2R2 415 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 RPTNQ6XPR3 784 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CBLL1Q75N03 491 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CADM2Q8N3J6 435 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 RPRMLQ8N4K4 120 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 MARVELD2Q8N4S9 558 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 OR52E4Q8NGH9 312 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 OR2V1Q8NHB1 315 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 LZICQ8WZA0 190 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 C3orf49Q96BT1 292 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 WFDC6Q9BQY6 131 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 PCDHAC1Q9H158 963 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 TMEM185BQ9H7F4 350 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 GORASP2Q9H8Y8 452 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 CLCF1Q9UBD9 225 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 ZNF175Q9Y473 711 aa17.75■□□□□ 0.43
LIME1-205ENST00000480139 TMED7-TICAM2A0A0A6YYA0 188 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 A0A0J9YW62 118 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 MBD3L4A6NDZ8 208 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 MBD3L3A6NE82 208 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 MBD3L5A6NJ08 208 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 H0YC42 278 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 M0R3H8 397 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 GMNNO75496 209 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 AGFG2O95081 481 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 LDLRP01130 860 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 GLI4P10075 376 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 SHC1P29353 583 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 SFTPDP35247 375 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 TIMP3P35625 211 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 TPD52P55327 224 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 HOXC5Q00444 222 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 BNIP2Q12982 314 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 SYT14P1Q58G82 188 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 GLYATQ6IB77 296 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 CHMP1BQ7LBR1 199 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 ATG4DQ86TL0 474 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 FAM156AQ8NDB6 213 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 OR6T1Q8NGN1 323 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 MBD3L2Q8NHZ7 208 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 DNAJA4Q8WW22 397 aaPredicted RBP17.74■□□□□ 0.43
LIME1-205ENST00000480139 WNT2BQ93097 391 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 FAM162AQ96A26 154 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 TRIB1Q96RU8 372 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 RPS6KB2Q9UBS0 482 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 EGFL7Q9UHF1 273 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 PACSIN3Q9UKS6 424 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 TMED7Q9Y3B3 224 aa17.74■□□□□ 0.43
LIME1-205ENST00000480139 TNFSF11O14788 317 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms