RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ABCG2	Q9UNQ0	655 aa		13.96	□□□□□ -0.17
HDLBP-238	ENST00000479894	MALRD1	Q5VYJ5	2156 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894		H3BNH8	94 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	KLF4	O43474	513 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	KCNK2	O95069	426 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR12D1	P0DN82	309 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	PPP3CB	P16298	524 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	HOXB9	P17482	250 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	CRISP3	P54108	245 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	FBXW4	P57775	412 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	NNAT	Q16517	81 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	CYP51A1	Q16850	503 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZSWIM7	Q19AV6	140 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	DCST2	Q5T1A1	773 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	GCNT6	Q5T4J0	391 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	INTS11	Q5TA45	600 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	AP1AR	Q63HQ0	302 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	NANOGP8	Q6NSW7	305 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLC30A6	Q6NXT4	461 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	NPSR1	Q6W5P4	371 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	KRT73	Q86Y46	540 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	CLEC4F	Q8N1N0	589 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	ARHGAP24	Q8N264	748 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR1J4	Q8NGS1	313 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	FAM110B	Q8TC76	370 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	ADO	Q96SZ5	270 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	TMEM204	Q9BSN7	226 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	SPATA5L1	Q9BVQ7	753 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	BEX2	Q9BXY8	128 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	TMEM38A	Q9H6F2	299 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	ARMC7	Q9H6L4	198 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	NANOG	Q9H9S0	305 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	A4GALT	Q9NPC4	353 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	SPAG4	Q9NPE6	437 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLAMF8	Q9P0V8	285 aa		13.95	□□□□□ -0.18
HDLBP-238	ENST00000479894		A0A0G2JPF8	293 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	HNRNPCL2	B2RXH8	293 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	HNRNPCL3	B7ZW38	293 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	HMGN4	O00479	90 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	EBAG9	O00559	213 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	TSPAN2	O60636	221 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	HNRNPCL4	P0DMR1	293 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLC6A2	P23975	617 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	RPS26	P62854	115 aa	Known RBP	13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	SRY	Q05066	204 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	GPAT3	Q53EU6	434 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	VWA1	Q6PCB0	445 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	PLXDC2	Q6UX71	529 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	LRRC74B	Q6ZQY2	392 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	MISP	Q8IVT2	679 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	C11orf65	Q8NCR3	313 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	PNPT1	Q8TCS8	783 aa	Known RBP	13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	PIK3R3	Q92569	461 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	SDF2	Q99470	211 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR2B2	Q9GZK3	357 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLCO5A1	Q9H2Y9	848 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	METTL7A	Q9H8H3	244 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	SLC6A13	Q9NSD5	602 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	ARL8B	Q9NVJ2	186 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	PRDM4	Q9UKN5	801 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	LAMP3	Q9UQV4	416 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	WDR45	Q9Y484	360 aa		13.94	□□□□□ -0.18
HDLBP-238	ENST00000479894	ALPK2	Q86TB3	2170 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894		B2RBV5	119 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	SCD	O00767	359 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	GNB5	O14775	395 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	SPRY1	O43609	319 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	GMNN	O75496	209 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	SERPINB7	O75635	380 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	TGM6	O95932	706 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	THBS1	P07996	1170 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	CD8B	P10966	210 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	RFX3	P48380	749 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	KCNJ5	P48544	419 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	LHX2	P50458	406 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	MVD	P53602	400 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	GFRA1	P56159	465 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	FGFBP1	Q14512	234 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	GTDC1	Q4AE62	458 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	REEP3	Q6NUK4	255 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	ADAM5	Q6NVV9	412 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	C22orf34	Q6ZV56	151 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	MSRB3	Q8IXL7	192 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	CNEP1R1	Q8N9A8	125 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	OR5D16	Q8NGK9	328 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	FBXO30	Q8TB52	745 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	AURKB	Q96GD4	344 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF607	Q96SK3	696 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	TBL1XR1	Q9BZK7	514 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	C1orf21	Q9H246	121 aa		13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	KAT8	Q9H7Z6	458 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-238	ENST00000479894	ZNF232	Q9UNY5	417 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms