RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SELENBP1Q13228 472 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 B3GNT6Q6ZMB0 384 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 LILRA2Q8N149 483 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 TNIP2Q8NFZ5 429 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 GPR32P1Q8NGA4 272 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 SLC26A7Q8TE54 656 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 KCTD14Q9BQ13 255 aaPredicted RBP24.11■■□□□ 1.45
CCM2-211ENST00000478582 TUBA1CQ9BQE3 449 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 TTYH2Q9BSA4 534 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 ADAM19Q9H013 955 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 CALHM2Q9HA72 323 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 ADA2Q9NZK5 511 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 SLC13A4Q9UKG4 626 aa24.11■■□□□ 1.45
CCM2-211ENST00000478582 CD8B2A6NJW9 211 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 ME2P23368 584 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 ZNF136P52737 540 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 COPZ1P61923 177 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 MERTKQ12866 999 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 SPATS1Q496A3 300 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 NSUN5P2Q63ZY6 315 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 WBP2NLQ6ICG8 309 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 UBQLNLQ8IYU4 475 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 DEFB107AQ8IZN7 70 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 RPRMLQ8N4K4 120 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 MARVELD2Q8N4S9 558 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 RBM15BQ8NDT2 890 aaKnown RBP24.1■■□□□ 1.45
CCM2-211ENST00000478582 ADGRG7Q96K78 797 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 SERINC1Q9NRX5 453 aa24.1■■□□□ 1.45
CCM2-211ENST00000478582 NBPF19A0A087WUL8 3843 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 GJE1A6NN92 205 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 ADAMDEC1O15204 470 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 FRS3O43559 492 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 HSD17B1P14061 328 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 FKBP2P26885 142 aaKnown RBP24.09■■□□□ 1.45
CCM2-211ENST00000478582 HTR1EP28566 365 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 CTU2Q2VPK5 515 aaKnown RBP24.09■■□□□ 1.45
CCM2-211ENST00000478582 SAMD4BQ5PRF9 694 aaKnown RBP24.09■■□□□ 1.45
CCM2-211ENST00000478582 ESPNLQ6ZVH7 1005 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 NCCRP1Q6ZVX7 275 aaPredicted RBP24.09■■□□□ 1.45
CCM2-211ENST00000478582 SMPDL3BQ92485 455 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 CDRT15Q96T59 188 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 ARHGDIGQ99819 225 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 C1orf21Q9H246 121 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 CTPS2Q9NRF8 586 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 CD300AQ9UGN4 299 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 MED12Q93074 2177 aa24.09■■□□□ 1.45
CCM2-211ENST00000478582 H0YC42 278 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 CXCR6O00574 342 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 SEC14L5O43304 696 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 FESP07332 822 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 GLI4P10075 376 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 POLR2HP52434 150 aaKnown RBP24.08■■□□□ 1.45
CCM2-211ENST00000478582 MAP2K6P52564 334 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 TPD52P55327 224 aaPredicted RBP24.08■■□□□ 1.45
CCM2-211ENST00000478582 RPS3AP61247 264 aaKnown RBP24.08■■□□□ 1.45
CCM2-211ENST00000478582 FXNQ16595 210 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 NRF1Q16656 503 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 C3orf33Q6P1S2 294 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 ADGRG3Q86Y34 549 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 LACC1Q8IV20 430 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 LSMEM1Q8N8F7 131 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 KLHL15Q96M94 604 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 BAG5Q9UL15 447 aa24.08■■□□□ 1.45
CCM2-211ENST00000478582 UNC79Q9P2D8 2635 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 A0A0J9YW62 118 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 CLCA1A8K7I4 914 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 TMEM229AB2RXF0 380 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 GSTA4O15217 222 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 UBOX5O94941 541 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 TACR3P29371 465 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 NUP107P57740 925 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 RGS8P57771 180 aaPredicted RBP24.07■■□□□ 1.44
CCM2-211ENST00000478582 HOXC5Q00444 222 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 PMPCAQ10713 525 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 RINLQ6ZS11 566 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 SEM1Q6ZVN7 128 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 SLC25A43Q8WUT9 341 aaPredicted RBP24.07■■□□□ 1.44
CCM2-211ENST00000478582 TRIB1Q96RU8 372 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 WFDC6Q9BQY6 131 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 TMEM185BQ9H7F4 350 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 PAQR5Q9NXK6 330 aaPredicted RBP24.07■■□□□ 1.44
CCM2-211ENST00000478582 CLCF1Q9UBD9 225 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 TESQ9UGI8 421 aaKnown RBP24.07■■□□□ 1.44
CCM2-211ENST00000478582 CHRNA9Q9UGM1 479 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 OSGIN1Q9UJX0 560 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 SPIN1Q9Y657 262 aaPredicted RBP24.07■■□□□ 1.44
CCM2-211ENST00000478582 CACNA1DQ01668 2161 aa24.07■■□□□ 1.44
CCM2-211ENST00000478582 MBD3L4A6NDZ8 208 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 MBD3L3A6NE82 208 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 MBD3L5A6NJ08 208 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 EIF1AYO14602 144 aaKnown RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 GGT1P19440 569 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 SHC1P29353 583 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 TIMP3P35625 211 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 TMEM176BQ3YBM2 270 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 LRRC23Q53EV4 343 aaPredicted RBP24.06■■□□□ 1.44
CCM2-211ENST00000478582 CYBRD1Q53TN4 286 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 PDSS1Q5T2R2 415 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 CHMP1BQ7LBR1 199 aa24.06■■□□□ 1.44
CCM2-211ENST00000478582 ARHGAP24Q8N264 748 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms