RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SELENBP1Q13228 472 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 PON3Q15166 354 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 SF3B4Q15427 424 aaKnown RBP eCLIP9.23□□□□□ -0.933e-12■■■■■ 40.8
HDAC6-222ENST00000478095 SGCBQ16585 318 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 VMACQ2NL98 169 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 TMEM176BQ3YBM2 270 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 SLC25A53Q5H9E4 307 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 RIPPLY2Q5TAB7 128 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 C3orf33Q6P1S2 294 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 XKRXQ6PP77 449 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 P4HA3Q7Z4N8 544 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ADGRE4PQ86SQ3 457 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CALHM3Q86XJ0 350 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ARMC8Q8IUR7 673 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CADM2Q8N3J6 435 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 OR10D3Q8NH80 312 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 OR2V1Q8NHB1 315 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 MBD3L2Q8NHZ7 208 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 FNDC9Q8TBE3 224 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 TMEM234Q8WY98 164 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 HPS1Q92902 700 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ADGRG7Q96K78 797 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 KLHL15Q96M94 604 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF583Q96ND8 569 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 LRRC37BQ96QE4 947 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF607Q96SK3 696 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 GPATCH1Q9BRR8 931 aaKnown RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 SPATA5L1Q9BVQ7 753 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 UCK2Q9BZX2 261 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ARMC7Q9H6L4 198 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CALHM2Q9HA72 323 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 EFCAB1Q9HAE3 211 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CTPS2Q9NRF8 586 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ACER3Q9NUN7 267 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ARL8BQ9NVJ2 186 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CLCF1Q9UBD9 225 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 MED12Q93074 2177 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 LRRK2Q5S007 2527 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 FAM220BPB1ANY3 271 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 PRSS44E7EML9 344 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 M0QX08 132 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 SERPINB7O75635 380 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 MFN2O95140 757 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 CLDN14O95500 239 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 TMIGD3P0DMS9 266 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 UQCRBP14927 111 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 AGAP20933 346 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 BMP5P22003 454 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 TACR3P29371 465 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 SLC7A1P30825 629 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 CEACAM8P31997 349 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 TIMP3P35625 211 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ACAA2P42765 397 aaKnown RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF136P52737 540 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 FOXF2Q12947 444 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 HBMQ6B0K9 141 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 C8orf82Q6P1X6 216 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 DHRS4L2Q6PKH6 230 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 MAMDC2Q7Z304 686 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF550Q7Z398 422 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 GRINAQ7Z429 371 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ARPINQ7Z6K5 226 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 SLC15A3Q8IY34 581 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF440Q8IYI8 595 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 CCDC197Q8NCU1 140 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 OR2T12Q8NG77 320 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 ASB5Q8WWX0 329 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 OSTF1Q92882 214 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 TAMM41Q96BW9 452 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 INTS12Q96CB8 462 aaKnown RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 REXO5Q96IC2 774 aaKnown RBP9.22□□□□□ -0.93
HDAC6-222ENST00000478095 WFDC6Q9BQY6 131 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 SRXN1Q9BYN0 137 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 COQ10BQ9H8M1 238 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 OSGIN1Q9UJX0 560 aa9.22□□□□□ -0.93
HDAC6-222ENST00000478095 TMED7-TICAM2A0A0A6YYA0 188 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 TMEM72A0PK05 275 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PRORSD1PA6NEY8 169 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 GJE1A6NN92 205 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 HSPB2A8KAH6 182 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 M0R3H8 397 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 NME4O00746 187 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 NDUFAB1O14561 156 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 ADAMDEC1O15204 470 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 AQP8O94778 261 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 TFPIP10646 304 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 HTR1EP28566 365 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 APOBEC1P41238 236 aaKnown RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SLC1A3P43003 542 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 CRYBA2P53672 197 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 CARD18P57730 90 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PSME3P61289 254 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 COPZ1P61923 177 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 LIPEQ05469 1076 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms