RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SNTA1Q13424 505 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ALG10BQ5I7T1 473 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 NR2C2APQ86WQ0 139 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 COMMD2Q86X83 199 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 FOXRED2Q8IWF2 684 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 RERGQ96A58 199 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 PEX11GQ96HA9 241 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 RNF170Q96K19 258 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 LINC00615Q96LM1 132 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 TTYH1Q9H313 450 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 PELI2Q9HAT8 420 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 FGF22Q9HCT0 170 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 LHX9Q9NQ69 397 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ACOXLQ9NUZ1 547 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SIDT1Q9NXL6 827 aaKnown RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 BABAM2Q9NXR7 383 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 MED31Q9Y3C7 131 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 C17orf51A8MQB3 221 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ALX3O95076 343 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 TBX6O95947 436 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 LGI1O95970 557 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 MT-ND5P03915 603 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 H2AFB2P0C5Z0 115 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 GSTM3P21266 225 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 EVX1P49640 407 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 GAS6Q14393 721 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 OR1Q1Q15612 314 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 NKPD1Q17RQ9 610 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 C4orf46Q504U0 113 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 TMEM239Q8WW34 195 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ELP4Q96EB1 424 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 WDR34Q96EX3 536 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SPACA7Q96KW9 195 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SIGLEC11Q96RL6 698 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SLC25A19Q9HC21 320 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 B4DGG1 531 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 M0R233 179 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 FLRT2O43155 660 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 APOC3P02656 99 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ACADMP11310 421 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ANXA3P12429 323 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 CPEP16870 476 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 P2RX3P56373 397 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SNRPGP62308 76 aaKnown RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 MELKQ14680 651 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ARHGAP19Q14CB8 494 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 MLF2Q15773 248 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 BICRALQ6AI39 1079 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 ZNF627Q7L945 461 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 RASGRP3Q8IV61 690 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 LRRC56Q8IYG6 542 aaPredicted RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 OR4K14Q8NGD5 310 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 OR2A1Q8NGT9 310 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 TSEN15Q8WW01 171 aaKnown RBP9.05□□□□□ -0.96
CMC1-209ENST00000477739 THAP4Q8WY91 577 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 SOHLH2Q9NX45 425 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
CMC1-209ENST00000477739 COL4A6Q14031 1691 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 MRPS14O60783 128 aaKnown RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 EPPINO95925 133 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 PTGS2P35354 604 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 FUT5Q11128 374 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 BCL2A1Q16548 175 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 C12orf73Q69YU5 71 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ELP2Q6IA86 826 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ADAMTSL4Q6UY14 1074 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ZNF836Q6ZNA1 936 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 RTL4Q6ZR62 310 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 QSOX2Q6ZRP7 698 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 GPR155Q7Z3F1 870 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 FAM109AQ8N4B1 249 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 OR6N2Q8NGY6 317 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 RPLP0P6Q8NHW5 317 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ZNF563Q8TA94 476 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ACOT11Q8WXI4 607 aaPredicted RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 HSD17B8Q92506 261 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 RBM18Q96H35 190 aaKnown RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 AP1M2Q9Y6Q5 423 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 A0A1W2PRQ8 180 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ZNF3P17036 446 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 GDI2P50395 445 aaKnown RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 ERVK-21P61565 698 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 TSPAN31Q12999 210 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ASAH1Q13510 395 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 FAM109BQ6ICB4 259 aaPredicted RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 FBXO46Q6PJ61 603 aaPredicted RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 APOOLQ6UXV4 268 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 RTL10Q7L3V2 364 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 LRRC25Q8N386 305 aaPredicted RBP9.04□□□□□ -0.96
CMC1-209ENST00000477739 FAM26EQ8N5C1 309 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ZNF676Q8N7Q3 588 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 OR9A4Q8NGU2 314 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 ABHD4Q8TB40 342 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 TMEM43Q9BTV4 400 aa9.04□□□□□ -0.96
CMC1-209ENST00000477739 PDCD10Q9BUL8 212 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms