RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MPDZO75970 2070 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 A0A087WZY1 265 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 TMEM247A6NEH6 219 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 PRORSD1PA6NEY8 169 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 CFAP73A6NFT4 308 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 FAM220BPB1ANY3 271 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 CXCL13O43927 109 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 NTN1O95631 604 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 UBL4AP11441 157 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 BMP2P12643 396 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF17P17021 662 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 PRKCAP17252 672 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ME2P23368 584 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 KIR2DL2P43627 348 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-209ENST00000477554 GSK3BP49841 420 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ASCL1P50553 236 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 SIRPAP78324 504 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 RBBP4Q09028 425 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 QPRTQ15274 297 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 RPS26P11Q5JNZ5 115 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-209ENST00000477554 GCNT6Q5T4J0 391 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 PPP4R4Q6NUP7 873 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ERICH5Q6P6B1 374 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 PGM2L1Q6PCE3 622 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 NET1Q7Z628 596 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-209ENST00000477554 BTLAQ7Z6A9 289 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 CALHM3Q86XJ0 350 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 MISPQ8IVT2 679 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ZZZ3Q8IYH5 903 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF527Q8NB42 609 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 OR2T12Q8NG77 320 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 LINC01560Q8TB33 94 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 ZBTB8AQ96BR9 441 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 STARD4Q96DR4 205 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 DNAJA3Q96EY1 480 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 REXO5Q96IC2 774 aaKnown RBP15.83■□□□□ 0.12
PTPN7-209ENST00000477554 LURAP1Q96LR2 239 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 TMEM38AQ9H6F2 299 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 EXD2Q9NVH0 621 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 CRIM1Q9NZV1 1036 aa15.83■□□□□ 0.12
PTPN7-209ENST00000477554 C7orf72A4D263 438 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 FAM47E-STBD1D6RA91 191 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF264O43296 627 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 GZMMP51124 257 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 CEACAM7Q14002 265 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 GNA13Q14344 377 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 FGFBP1Q14512 234 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 ATAD3BQ5T9A4 648 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 P4HA3Q7Z4N8 544 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 LILRA2Q8N149 483 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF619Q8N2I2 560 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 RNF148Q8N7C7 305 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 CNEP1R1Q8N9A8 125 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 FAM71CQ8NEG0 241 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 OR5W2Q8NH69 310 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 CNOT9Q92600 299 aaKnown RBP15.82■□□□□ 0.12
PTPN7-209ENST00000477554 CLPTM1LQ96KA5 538 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 TM9SF2Q99805 663 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 OPN3Q9H1Y3 402 aaPredicted RBP15.82■□□□□ 0.12
PTPN7-209ENST00000477554 PIF1Q9H611 641 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 RNF122Q9H9V4 155 aa15.82■□□□□ 0.12
PTPN7-209ENST00000477554 ELOVL7A1L3X0 281 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 AP3D1O14617 1153 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 PDE5AO76074 875 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 AK1P00568 194 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 CSTAP01040 98 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 NID1P14543 1247 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 NQO1P15559 274 aaKnown RBP15.81■□□□□ 0.12
PTPN7-209ENST00000477554 RAC1P63000 192 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 BNIP2Q12982 314 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■□□□ 12.6
PTPN7-209ENST00000477554 GUSBP1Q15486 140 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 FBXL19-AS1Q494R0 122 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 SLC30A8Q8IWU4 369 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 C11orf65Q8NCR3 313 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 ROBO4Q8WZ75 1007 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 RNASE6Q93091 150 aaKnown RBP15.81■□□□□ 0.12
PTPN7-209ENST00000477554 MAL2Q969L2 176 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 LAT2Q9GZY6 243 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 COQ10BQ9H8M1 238 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 A4GALTQ9NPC4 353 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 GALNT8Q9NY28 637 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 P2RX2Q9UBL9 471 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 PACSIN3Q9UKS6 424 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 LIPT1Q9Y234 373 aa15.81■□□□□ 0.12
PTPN7-209ENST00000477554 A0A1W2PNR3 127 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 ADAMDEC1O15204 470 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 GMNNO75496 209 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 STAMBPO95630 424 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 IL18BPO95998 194 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 CGAP01215 116 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 ARAFP10398 606 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 TCN1P20061 433 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-209ENST00000477554 RYKP34925 604 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 OPRM1P35372 400 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 TRIM25Q14258 630 aaKnown RBP15.8■□□□□ 0.12
PTPN7-209ENST00000477554 ADRM1Q16186 407 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 VMACQ2NL98 169 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 AP1ARQ63HQ0 302 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF474Q6S9Z5 364 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms