RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEM44Q2T9K0 475 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 PLXDC2Q6UX71 529 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 STAC2Q6ZMT1 411 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 GGNQ86UU5 652 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 P2RY8Q86VZ1 359 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 OR5M1Q8NGP8 315 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 FAM168AQ92567 244 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 AKAP1Q92667 903 aaKnown RBP eCLIP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 HS6ST2Q96MM7 605 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 STACQ99469 402 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 POTEKPQ9BYX7 375 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 GSTO2Q9H4Y5 243 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 SERINC1Q9NRX5 453 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 MED17Q9NVC6 651 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 KLHL9Q9P2J3 617 aa6.47□□□□□ -1.37
BRCA1-214ENST00000477152 FAF1Q9UNN5 650 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-214ENST00000477152 MED12Q93074 2177 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 NPIPB8E9PQR5 432 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 TNFSF11O14788 317 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 RIPK2O43353 540 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 GMFGO60234 142 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 AQP8O94778 261 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 YES1P07947 543 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 FKBP2P26885 142 aaKnown RBP6.46□□□□□ -1.37
BRCA1-214ENST00000477152 AGTR1P30556 359 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 SLC7A1P30825 629 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 P2RX1P51575 399 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 DSCR9P59020 149 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 MLC1Q15049 377 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 HEPHL1Q6MZM0 1159 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 RNF165Q6ZSG1 346 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 GALNT10Q86SR1 603 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 TDRPQ86YL5 185 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 TOR1AIP2Q8NFQ8 470 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 OR56A1Q8NGH5 318 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 ADAMTS15Q8TE58 950 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 PIK3R3Q92569 461 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 ZHX1-C8orf76Q96EF9 292 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 MARK4Q96L34 752 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 ADAD1Q96M93 576 aaKnown RBP6.46□□□□□ -1.37
BRCA1-214ENST00000477152 RNF145Q96MT1 663 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 DUSP22Q9NRW4 184 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 NTMQ9P121 344 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 MGAT4BQ9UQ53 548 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 LAMP3Q9UQV4 416 aa6.46□□□□□ -1.37
BRCA1-214ENST00000477152 SPIN1Q9Y657 262 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-214ENST00000477152 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.37
BRCA1-214ENST00000477152 ACANP16112 2415 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 NIPBLQ6KC79 2804 aaeCLIP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 TRIM64A6NGJ6 449 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 TRIM64BA6NI03 449 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 DUXAA6NLW8 204 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 INAFM1C9JVW0 142 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 GOLGA8RI6L899 631 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 COPEO14579 308 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 AZIN1O14977 448 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CLOCKO15516 846 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CRLF1O75462 422 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 LYPLA1O75608 230 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 KCNK2O95069 426 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 AK1P00568 194 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CPA3P15088 417 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CCKARP32238 428 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 SELENBP1Q13228 472 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 ITGADQ13349 1161 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 PLPPR5Q32ZL2 321 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 SPDYE7PQ495Y7 208 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 C1QTNF12Q5T7M4 302 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 AGAP6Q5VW22 663 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 LIPMQ5VYY2 423 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 KLHL17Q6TDP4 642 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 FCRLAQ7L513 359 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CXXC5Q7LFL8 322 aaKnown RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF551Q7Z340 670 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 PPP1R14CQ8TAE6 165 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 FAM110BQ8TC76 370 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 SMAP2Q8WU79 429 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM234Q8WY98 164 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 HOXB13Q92826 284 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 MRGPRX4Q96LA9 322 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 PPP3R2Q96LZ3 170 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 C16orf45Q96MC5 204 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 KCNA7Q96RP8 456 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 RHNO1Q9BSD3 238 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 TMEM204Q9BSN7 226 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 ZCCHC3Q9NUD5 404 aaKnown RBP6.46□□□□□ -1.38
BRCA1-214ENST00000477152 EMC3Q9P0I2 261 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 KLHL13Q9P2N7 655 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CLEC4AQ9UMR7 237 aa6.46□□□□□ -1.38
BRCA1-214ENST00000477152 CHD3Q12873 2000 aaKnown RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 PCNX3Q9H6A9 2034 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 GXYLT2A0PJZ3 443 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 H0YC42 278 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF195O14628 629 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 EIF4E2O60573 245 aaKnown RBP6.45□□□□□ -1.38
BRCA1-214ENST00000477152 AGR2O95994 175 aa6.45□□□□□ -1.38
BRCA1-214ENST00000477152 CRHR1P34998 444 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms