RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-209ENST00000477002 PNPT1Q8TCS8 783 aaKnown RBP16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 CCDC106Q9BWC9 280 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 HDHD5Q9BXW7 423 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 ACTR6Q9GZN1 396 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 SLC38A1Q9H2H9 487 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 RMND5AQ9H871 391 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 BCO1Q9HAY6 547 aa16.09■□□□□ 0.17
CNTNAP3-209ENST00000477002 IGHV3-15A0A0B4J1V0 119 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 SULT2B1O00204 365 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 CYTIPO60759 359 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 DIAPH2O60879 1101 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 ANP32DO95626 131 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 CHRM4P08173 479 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 ZCCHC18P0CG32 403 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 NR2F1P10589 423 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 DIO1P49895 249 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 POLR2JP52435 117 aaKnown RBP16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 GNA13Q14344 377 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 EPGNQ6UW88 154 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 TMPPEQ6ZT21 453 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 GRINAQ7Z429 371 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 MIER2Q8N344 545 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 STEAP2Q8NFT2 490 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 ITCHQ96J02 903 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 C7orf26Q96N11 449 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 PSD2Q9BQI7 771 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 CTPS2Q9NRF8 586 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 CHRNA9Q9UGM1 479 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 FREM1Q5H8C1 2179 aa16.08■□□□□ 0.16
CNTNAP3-209ENST00000477002 CLDN24A6NM45 220 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 SMAD9O15198 467 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 GCM2O75603 506 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 DBIP07108 87 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 IL7RP16871 459 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 FPR1P21462 350 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 LOXP28300 417 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 HTR3AP46098 478 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 CLK1P49759 484 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 ADAM8P78325 824 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 PLAURQ03405 335 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 RASGEF1BQ0VAM2 473 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 ACKR1Q16570 336 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 BEX5Q5H9J7 111 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 CXorf67Q86X51 503 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 GABRG1Q8N1C3 465 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 WDR60Q8WVS4 1066 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 CNOT9Q92600 299 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 PIGTQ969N2 578 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 SLC6A13Q9NSD5 602 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 P2RX2Q9UBL9 471 aa16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 ING1Q9UK53 422 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3-209ENST00000477002 MTORP42345 2549 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 ZNF724A8MTY0 619 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 KLF4O43474 513 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 TGDSO95455 350 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 FESP07332 822 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 TFPIP10646 304 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 RPS4Y1P22090 263 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 IDH2P48735 452 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 MVDP53602 400 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 NR1H2P55055 460 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 P2RY6Q15077 328 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 SFRP5Q5T4F7 317 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 DNAJC14Q6Y2X3 702 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 MTDHQ86UE4 582 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 PEX5LQ8IYB4 626 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 LRRC8CQ8TDW0 803 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 ATP6V1G3Q96LB4 118 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 PIP5K1AQ99755 562 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 UBTD1Q9HAC8 227 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 TPT1P8Q9HAU6 139 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 THUMPD1Q9NXG2 353 aaKnown RBP16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 CALML5Q9NZT1 146 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 HDGFL3Q9Y3E1 203 aa16.06■□□□□ 0.16
CNTNAP3-209ENST00000477002 C2CD3Q4AC94 2353 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 FAM234BA2RU67 622 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 FAAHO00519 579 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 ADAM11O75078 769 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 PMS2P2O95744 297 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 UQCRBP14927 111 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 HOXC12P31275 282 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 CRATP43155 626 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 OR3A2P47893 321 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 FOXD4Q12950 439 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 C6orf10Q5SRN2 563 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 C20orf204Q6ZNR8 217 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 ADGRG3Q86Y34 549 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 WFDC8Q8IUA0 241 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 OR9I1Q8NGQ6 314 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 VPS33AQ96AX1 596 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 S100PBPQ96BU1 408 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 ZHX1-C8orf76Q96EF9 292 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 USB1Q9BQ65 265 aaKnown RBP16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 TCF7L2Q9NQB0 619 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 RAI1Q7Z5J4 1906 aaPredicted RBP16.05■□□□□ 0.16
CNTNAP3-209ENST00000477002 SETD2Q9BYW2 2564 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms