RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 NDUFAF6Q330K2 333 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 ZIK1Q3SY52 487 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 KCTD21Q4G0X4 260 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SLC25A30Q5SVS4 291 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SLX4IPQ5VYV7 408 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 C12orf73Q69YU5 71 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 WBP2NLQ6ICG8 309 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 UNQ6494/PRO21346Q6UXR6 183 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 MARCH3Q86UD3 253 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 RPS19BP1Q86WX3 136 aaKnown RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SLC43A2Q8N370 569 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 FADS6Q8N9I5 356 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF555Q8NEP9 628 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 RHOXF1Q8NHV9 184 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PIGXQ8TBF5 258 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PHOSPHO1Q8TCT1 267 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 GPR119Q8TDV5 335 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM255BQ8WV15 326 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TRUB1Q8WWH5 349 aaKnown RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CYGBQ8WWM9 190 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SGCZQ96LD1 299 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CNBD2Q96M20 576 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 KLHDC3Q9BQ90 382 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 ANGPTL4Q9BY76 406 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TBL1XR1Q9BZK7 514 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 SLC25A19Q9HC21 320 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PROK2Q9HC23 129 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 MEPEQ9NQ76 525 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 PNPLA3Q9NST1 481 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 KIF17Q9P2E2 1029 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 IL17BQ9UHF5 180 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM5Q9Y2B1 443 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CARD8Q9Y2G2 431 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 MSRB2Q9Y3D2 182 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CHCHD2Q9Y6H1 151 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-207ENST00000474825 CACNA1BQ00975 2339 aa6.03□□□□□ -1.44
ATG4A-207ENST00000474825 IGKV1D-42A0A075B6H8 117 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ANKUB1A6NFN9 424 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 GTPBP1O00178 669 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 BCKDKO14874 412 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CDC40O60508 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 NPIPB7O75200 414 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 TNFAIP8O95379 198 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CLIC3O95833 236 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 RPSAP08865 295 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CCDC159P0C7I6 412 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 C1QTNF9P0C862 333 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SPINK2P20155 84 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 OTX2P32243 289 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SOX3P41225 446 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 GIPRP48546 466 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 IDH2P48735 452 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SSR4P51571 173 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 MAP2K6P52564 334 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 NUP107P57740 925 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 COPZ1P61923 177 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SNRPGP62308 76 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 EGR4Q05215 589 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CD47Q08722 323 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CDK5R2Q13319 367 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 APOFQ13790 326 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 BLMHQ13867 455 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CBFBQ13951 182 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 MAD2L1BPQ15013 274 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 PTGES3Q15185 160 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ALG10BQ5I7T1 473 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 DCAF10Q5QP82 559 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 RBM48Q5RL73 367 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 C6orf141Q5SZD1 244 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SLC30A6Q6NXT4 461 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF730Q6ZMV8 503 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 GALNT5Q7Z7M9 940 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF227Q86WZ6 799 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 KIF18BQ86Y91 864 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 MARCH9Q86YJ5 346 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 NRMQ8IXM6 262 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 C8orf59Q8N0T1 100 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF614Q8N883 585 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 KDF1Q8NAX2 398 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SETD9Q8NE22 299 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 OR10G3Q8NGC4 313 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 OR6S1Q8NH40 331 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 B4GALNT2Q8NHY0 566 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 BRIX1Q8TDN6 353 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 DUSP19Q8WTR2 217 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 THAP4Q8WY91 577 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ST8SIA1Q92185 356 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 HDAC2Q92769 488 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 GTPBP3Q969Y2 492 aaKnown RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 FER1L6-AS2Q96M78 137 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 APOL4Q9BPW4 351 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CDCP1Q9H5V8 836 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 KRCC1Q9NPI7 259 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-207ENST00000474825 CTPS2Q9NRF8 586 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 SDHAF3Q9NRP4 125 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 PLCXD1Q9NUJ7 323 aa6.02□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF226Q9NYT6 803 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms