RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RTL6Q6ICC9 239 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ERICH5Q6P6B1 374 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 C16orf89Q6UX73 402 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 Q6ZPB1 254 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 VTCN1Q7Z7D3 282 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 PATL1Q86TB9 770 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ADGRG3Q86Y34 549 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 GHDCQ8N2G8 530 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 RPRMLQ8N4K4 120 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 OR6T1Q8NGN1 323 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 PHF10Q8WUB8 498 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 WDYHV1Q96HA8 205 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 RNF145Q96MT1 663 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF607Q96SK3 696 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 KCTD14Q9BQ13 255 aaPredicted RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 PINK1Q9BXM7 581 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 CADM1Q9BY67 442 aaKnown RBP6.3□□□□□ -1.4
LIMD1-204ENST00000474665 ADAM19Q9H013 955 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 B4GALT7Q9UBV7 327 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 DKKL1Q9UK85 242 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 SNX13Q9Y5W8 968 aa6.3□□□□□ -1.4
LIMD1-204ENST00000474665 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 FN1P02751 2386 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 A0A087WZY1 265 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 CFAP73A6NFT4 308 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 NPIPA2E9PIF3 369 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 NPIPA3F8WFD2 350 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ACOT8O14734 319 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ARPC2O15144 300 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 GSC2O15499 205 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 WIPF1O43516 503 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SLC19A2O60779 497 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SERPINB7O75635 380 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 OPN1LWP04000 364 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 FESP07332 822 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 STSP08842 583 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF708P17019 499 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ATP6V1B2P21281 511 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 CHMP24386 653 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 IDH2P48735 452 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 GANABQ14697 944 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 TOMM20Q15388 145 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 CTU2Q2VPK5 515 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 GXYLT1Q4G148 440 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 INTS11Q5TA45 600 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 RAET1LQ5VY80 246 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ARHGAP11AQ6P4F7 1023 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 PLXDC2Q6UX71 529 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 C3P1Q6ZMU1 363 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SEM1Q6ZVN7 128 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 NCCRP1Q6ZVX7 275 aaPredicted RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 PLEKHM3Q6ZWE6 761 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ASRGL1Q7L266 308 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ADGRE4PQ86SQ3 457 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 GGNQ86UU5 652 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 KRT73Q86Y46 540 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 DOLPP1Q86YN1 238 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SLC30A8Q8IWU4 369 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 MARVELD2Q8N4S9 558 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 OR5M9Q8NGP3 310 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 OR14L1PQ8NHC6 308 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 FAM57AQ8TBR7 257 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 FIG4Q92562 907 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ABTB1Q969K4 478 aaPredicted RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SLC35B4Q969S0 331 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 RELTQ969Z4 430 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ZBTB8AQ96BR9 441 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 SFXN2Q96NB2 322 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 BTBD10Q9BSF8 475 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 THTPAQ9BU02 230 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 PTGES2Q9H7Z7 377 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 GORASP2Q9H8Y8 452 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 PNPLA3Q9NST1 481 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ACER3Q9NUN7 267 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 DCAF13Q9NV06 445 aaKnown RBP6.29□□□□□ -1.4
LIMD1-204ENST00000474665 NDE1Q9NXR1 346 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 PLCE1Q9P212 2302 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 TINAGQ9UJW2 476 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 OSGIN1Q9UJX0 560 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF232Q9UNY5 417 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 FAM215AQ9Y5M1 114 aa6.29□□□□□ -1.4
LIMD1-204ENST00000474665 IGKV1D-42A0A075B6H8 117 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 A0A0J9YW62 118 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 A0A1B0GWA3 101 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ZC3H12DA2A288 527 aaKnown RBP6.28□□□□□ -1.4
LIMD1-204ENST00000474665 OR14I1A6ND48 311 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 FFAR1O14842 300 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ADAMDEC1O15204 470 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 PRSS23O95084 383 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 NUDT14O95848 222 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 ACTL6AO96019 429 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SERPINA1P01009 418 aa6.28□□□□□ -1.4
LIMD1-204ENST00000474665 SEMG1P04279 462 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms