RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 NDUFS7O75251 213 aa18.02■□□□□ 0.48
APP-215ENST00000474136 EFNA1P20827 205 aaPredicted RBP18.02■□□□□ 0.48
APP-215ENST00000474136 EVI2BP34910 448 aa18.02■□□□□ 0.48
APP-215ENST00000474136 KRT20P35900 424 aa18.02■□□□□ 0.48
APP-215ENST00000474136 CHI3L1P36222 383 aaPredicted RBP18.02■□□□□ 0.48
APP-215ENST00000474136 CDKN2CP42773 168 aa18.02■□□□□ 0.48
APP-215ENST00000474136 CCT3P49368 545 aaKnown RBP18.02■□□□□ 0.48
APP-215ENST00000474136 ANXA11P50995 505 aaKnown RBP18.02■□□□□ 0.48
APP-215ENST00000474136 CTU2Q2VPK5 515 aaKnown RBP18.02■□□□□ 0.48
APP-215ENST00000474136 KRTAP24-1Q3LI83 254 aa18.02■□□□□ 0.48
APP-215ENST00000474136 ZNF628Q5EBL2 1059 aa18.02■□□□□ 0.48
APP-215ENST00000474136 METTL25Q8N6Q8 603 aa18.02■□□□□ 0.48
APP-215ENST00000474136 OR56A1Q8NGH5 318 aa18.02■□□□□ 0.48
APP-215ENST00000474136 GTPBP3Q969Y2 492 aaKnown RBP18.02■□□□□ 0.48
APP-215ENST00000474136 ELP4Q96EB1 424 aa18.02■□□□□ 0.48
APP-215ENST00000474136 VSTM2LQ96N03 204 aa18.02■□□□□ 0.48
APP-215ENST00000474136 SLC35A5Q9BS91 424 aa18.02■□□□□ 0.48
APP-215ENST00000474136 THUMPD3Q9BV44 507 aaKnown RBP18.02■□□□□ 0.48
APP-215ENST00000474136 RTN4RQ9BZR6 473 aa18.02■□□□□ 0.48
APP-215ENST00000474136 TPT1P8Q9HAU6 139 aa18.02■□□□□ 0.48
APP-215ENST00000474136 FLRT3Q9NZU0 649 aa18.02■□□□□ 0.48
APP-215ENST00000474136 VAPAQ9P0L0 249 aa18.02■□□□□ 0.48
APP-215ENST00000474136 SLAMF8Q9P0V8 285 aa18.02■□□□□ 0.48
APP-215ENST00000474136 NTMQ9P121 344 aa18.02■□□□□ 0.48
APP-215ENST00000474136 MAGED1Q9Y5V3 778 aaPredicted RBP18.02■□□□□ 0.48
APP-215ENST00000474136 SHISA8B8ZZ34 492 aa18.01■□□□□ 0.47
APP-215ENST00000474136 GSC2O15499 205 aa18.01■□□□□ 0.47
APP-215ENST00000474136 GPRIN2O60269 458 aa18.01■□□□□ 0.47
APP-215ENST00000474136 IGHV4-39P01824 125 aa18.01■□□□□ 0.47
APP-215ENST00000474136 GSNP06396 782 aa18.01■□□□□ 0.47
APP-215ENST00000474136 DANCRP0C864 163 aa18.01■□□□□ 0.47
APP-215ENST00000474136 HOXB9P17482 250 aaPredicted RBP18.01■□□□□ 0.47
APP-215ENST00000474136 SLC6A2P23975 617 aa18.01■□□□□ 0.47
APP-215ENST00000474136 SOAT1P35610 550 aa18.01■□□□□ 0.47
APP-215ENST00000474136 PNLIPRP2P54317 469 aa18.01■□□□□ 0.47
APP-215ENST00000474136 SGCBQ16585 318 aa18.01■□□□□ 0.47
APP-215ENST00000474136 SAMD4BQ5PRF9 694 aaKnown RBP18.01■□□□□ 0.47
APP-215ENST00000474136 DNAJC14Q6Y2X3 702 aaPredicted RBP18.01■□□□□ 0.47
APP-215ENST00000474136 SLC44A2Q8IWA5 706 aaPredicted RBP18.01■□□□□ 0.47
APP-215ENST00000474136 OR9A2Q8NGT5 310 aa18.01■□□□□ 0.47
APP-215ENST00000474136 OR6K3Q8NGY3 331 aa18.01■□□□□ 0.47
APP-215ENST00000474136 FBXO27Q8NI29 283 aa18.01■□□□□ 0.47
APP-215ENST00000474136 ZFP90Q8TF47 636 aa18.01■□□□□ 0.47
APP-215ENST00000474136 RAB3IPQ96QF0 476 aaPredicted RBP18.01■□□□□ 0.47
APP-215ENST00000474136 ECSITQ9BQ95 431 aa18.01■□□□□ 0.47
APP-215ENST00000474136 CXorf36Q9H7Y0 433 aa18.01■□□□□ 0.47
APP-215ENST00000474136 FOLH1BQ9HBA9 442 aa18.01■□□□□ 0.47
APP-215ENST00000474136 SIRT3Q9NTG7 399 aaPredicted RBP18.01■□□□□ 0.47
APP-215ENST00000474136 THUMPD1Q9NXG2 353 aaKnown RBP18.01■□□□□ 0.47
APP-215ENST00000474136 SLC25A37Q9NYZ2 338 aa18.01■□□□□ 0.47
APP-215ENST00000474136 LIPT1Q9Y234 373 aa18.01■□□□□ 0.47
APP-215ENST00000474136 EMC9Q9Y3B6 208 aa18.01■□□□□ 0.47
APP-215ENST00000474136 RNF103-CHMP3A0A140T963 221 aa18■□□□□ 0.47
APP-215ENST00000474136 CFAP73A6NFT4 308 aa18■□□□□ 0.47
APP-215ENST00000474136 CLOCKO15516 846 aa18■□□□□ 0.47
APP-215ENST00000474136 FAM157CP0CG43 387 aa18■□□□□ 0.47
APP-215ENST00000474136 PGM1P36871 562 aa18■□□□□ 0.47
APP-215ENST00000474136 RPS3AP61247 264 aaKnown RBP18■□□□□ 0.47
APP-215ENST00000474136 FADDQ13158 208 aa18■□□□□ 0.47
APP-215ENST00000474136 ADAM5Q6NVV9 412 aa18■□□□□ 0.47
APP-215ENST00000474136 DNM1P46Q6ZS02 220 aa18■□□□□ 0.47
APP-215ENST00000474136 NEURL3Q96EH8 262 aa18■□□□□ 0.47
APP-215ENST00000474136 CDRT15Q96T59 188 aa18■□□□□ 0.47
APP-215ENST00000474136 SPATA9Q9BWV2 254 aa18■□□□□ 0.47
APP-215ENST00000474136 PRRG4Q9BZD6 226 aa18■□□□□ 0.47
APP-215ENST00000474136 DDX18Q9NVP1 670 aaKnown RBP18■□□□□ 0.47
APP-215ENST00000474136 ADA2Q9NZK5 511 aa18■□□□□ 0.47
APP-215ENST00000474136 TMEM181Q9P2C4 612 aa18■□□□□ 0.47
APP-215ENST00000474136 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
APP-215ENST00000474136 NUP214P35658 2090 aaPredicted RBP18■□□□□ 0.47
APP-215ENST00000474136 FADS1O60427 444 aa17.99■□□□□ 0.47
APP-215ENST00000474136 COQ9O75208 318 aa17.99■□□□□ 0.47
APP-215ENST00000474136 PLGP00747 810 aaPredicted RBP17.99■□□□□ 0.47
APP-215ENST00000474136 FCGR2AP12318 317 aa17.99■□□□□ 0.47
APP-215ENST00000474136 GPX2P18283 190 aa17.99■□□□□ 0.47
APP-215ENST00000474136 CTBP2P56545 445 aa17.99■□□□□ 0.47
APP-215ENST00000474136 FAPQ12884 760 aa17.99■□□□□ 0.47
APP-215ENST00000474136 TP53BP2Q13625 1128 aa17.99■□□□□ 0.47
APP-215ENST00000474136 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.99■□□□□ 0.47
APP-215ENST00000474136 ZCCHC12Q6PEW1 402 aa17.99■□□□□ 0.47
APP-215ENST00000474136 TMEM107Q6UX40 140 aa17.99■□□□□ 0.47
APP-215ENST00000474136 GGNQ86UU5 652 aa17.99■□□□□ 0.47
APP-215ENST00000474136 MSRB3Q8IXL7 192 aa17.99■□□□□ 0.47
APP-215ENST00000474136 SLC15A3Q8IY34 581 aa17.99■□□□□ 0.47
APP-215ENST00000474136 OR2L13Q8N349 312 aa17.99■□□□□ 0.47
APP-215ENST00000474136 SMAP2Q8WU79 429 aaPredicted RBP17.99■□□□□ 0.47
APP-215ENST00000474136 FBXW5Q969U6 566 aa17.99■□□□□ 0.47
APP-215ENST00000474136 FAM120BQ96EK7 910 aaKnown RBP17.99■□□□□ 0.47
APP-215ENST00000474136 CPPED1Q9BRF8 314 aaPredicted RBP17.99■□□□□ 0.47
APP-215ENST00000474136 THTPAQ9BU02 230 aa17.99■□□□□ 0.47
APP-215ENST00000474136 ZCCHC3Q9NUD5 404 aaKnown RBP17.99■□□□□ 0.47
APP-215ENST00000474136 GDF2Q9UK05 429 aaPredicted RBP17.99■□□□□ 0.47
APP-215ENST00000474136 C19orf53Q9UNZ5 99 aaPredicted RBP17.99■□□□□ 0.47
APP-215ENST00000474136 RNF115Q9Y4L5 304 aa17.99■□□□□ 0.47
APP-215ENST00000474136 LINC01387J3KSC0 135 aa17.98■□□□□ 0.47
APP-215ENST00000474136 GMFGO60234 142 aa17.98■□□□□ 0.47
APP-215ENST00000474136 SS18L1O75177 396 aaPredicted RBP17.98■□□□□ 0.47
APP-215ENST00000474136 THBS1P07996 1170 aa17.98■□□□□ 0.47
APP-215ENST00000474136 EIF1AXP47813 144 aaKnown RBP17.98■□□□□ 0.47
APP-215ENST00000474136 SLC7A2P52569 658 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms