RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SLC6A2P23975 617 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 KIR2DL2P43627 348 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-203ENST00000474047 CDK6Q00534 326 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 MAPRE2Q15555 327 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 RUNDC3AQ59EK9 446 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 REEP3Q6NUK4 255 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 FAM214BQ7L5A3 538 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 BTLAQ7Z6A9 289 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 ZZZ3Q8IYH5 903 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 DPP10Q8N608 796 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 ACBD4Q8NC06 268 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 STARD4Q96DR4 205 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-203ENST00000474047 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 SPATA5L1Q9BVQ7 753 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
VAMP4-203ENST00000474047 CRYBG3Q68DQ2 2970 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CDHR4A6H8M9 788 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 ETV2O00321 342 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 AP3D1O14617 1153 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 PGM3O95394 542 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 GKN3PP0CG01 181 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 GPX2P18283 190 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 FKBP2P26885 142 aaKnown RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CSNK2A1P68400 391 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 SCARB2Q14108 478 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 RNPS1Q15287 305 aaKnown RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CYP51A1Q16850 503 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 SYT14P1Q58G82 188 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 DLEU7Q6UYE1 221 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CADM2Q8N3J6 435 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 ZNF607Q96SK3 696 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CGREF1Q99674 301 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 SPATA9Q9BWV2 254 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-203ENST00000474047 BCL2L10Q9HD36 194 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 GALNT8Q9NY28 637 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
VAMP4-203ENST00000474047 TRBV5-3A0A0A0MS03 114 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 A8MXE2 369 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 SULT2B1O00204 365 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 PRKD3O94806 890 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ARAFP10398 606 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ETS2P15036 469 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 POLR2HP52434 150 aaKnown RBP12.72□□□□□ -0.37
VAMP4-203ENST00000474047 RAC3P60763 192 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 EPS8Q12929 822 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 KLF10Q13118 480 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
VAMP4-203ENST00000474047 TMEM201Q5SNT2 666 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 RNF220Q5VTB9 566 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 STK32CQ86UX6 486 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 TMEM200AQ86VY9 491 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 CPPED1Q9BRF8 314 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-203ENST00000474047 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 SAR1AQ9NR31 198 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 SLC13A4Q9UKG4 626 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 ANGPT4Q9Y264 503 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 GMEB1Q9Y692 573 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 CELSR2Q9HCU4 2923 aa12.72□□□□□ -0.37
VAMP4-203ENST00000474047 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 SERPINB7O75635 380 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 KRT34O76011 436 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 ENPP1P22413 925 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 CXCR1P25024 350 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 TACR3P29371 465 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 SLC1A3P43003 542 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 DIO1P49895 249 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 MTPNP58546 118 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 SORDQ00796 357 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 CLIP4Q8N3C7 705 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 ZNF610Q8N9Z0 462 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 OR6K3Q8NGY3 331 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 FAM222BQ8WU58 562 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 DDIT4LQ96D03 193 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 IKZF5Q9H5V7 419 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 TMEM38AQ9H6F2 299 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 COQ10BQ9H8M1 238 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 FANCFQ9NPI8 374 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 NOTCH2Q04721 2471 aa12.71□□□□□ -0.37
VAMP4-203ENST00000474047 IGHV3-15A0A0B4J1V0 119 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms