RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RGS1Q08116 209 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 MGAT2Q10469 447 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 BCL2L15Q5TBC7 163 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 TBC1D3CQ6IPX1 549 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 CEACAM19Q7Z692 300 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 PXKQ7Z7A4 578 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 RANBP3LQ86VV4 465 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-214ENST00000473778 TBC1D3Q8IZP1 549 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-214ENST00000473778 OR52L1Q8NGH7 329 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 ABHD4Q8TB40 342 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 ZNRF4Q8WWF5 429 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 PATE1Q8WXA2 126 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 DEDD2Q8WXF8 326 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 FGF14Q92915 247 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 OR2M4Q96R27 311 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 ORAI3Q9BRQ5 295 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 TMEM168Q9H0V1 697 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 ABCG5Q9H222 651 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 SRMSQ9H3Y6 488 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 FN3KQ9H479 309 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 TRIM36Q9NQ86 728 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 PILRAQ9UKJ1 303 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 MPDZO75970 2070 aa10.11□□□□□ -0.79
C9orf3-214ENST00000473778 TRAV6A0A075B6T7 132 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PRR23D1E9PI22 279 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TRIM77I1YAP6 450 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CHP2O43745 196 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 ORC5O43913 435 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PTP4A3O75365 173 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 STX11O75558 287 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PPP1R3DO95685 299 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TFP02787 698 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CA3P07451 260 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CTSBP07858 339 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PRR23D2P0DMB1 279 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 BMP7P18075 431 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 COL9A1P20849 921 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 MAP3K8P41279 467 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 RFX3P48380 749 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 ESCO2Q56NI9 601 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 RNASE12Q5GAN4 147 aaKnown RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TMEM31Q5JXX7 168 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TMPRSS11FQ6ZWK6 438 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 OR11H7Q8NGC8 314 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 OR51L1Q8NGJ5 315 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 LILRB1Q8NHL6 650 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CNOT9Q92600 299 aaKnown RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CREB3L1Q96BA8 519 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TNFRSF13CQ96RJ3 184 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 SERINC2Q96SA4 455 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TRPV4Q9HBA0 871 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 SLCO1C1Q9NYB5 712 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 SLC23A1Q9UHI7 598 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 COLEC10Q9Y6Z7 277 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 A0A1W2PRG6 482 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CYR61O00622 381 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TRIM3O75382 744 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 UGT2B7P16662 529 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 NPR2P20594 1047 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PYCR1P32322 319 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PITPNBP48739 271 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 INPP1P49441 399 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 FAM53BQ14153 422 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 FCN2Q15485 313 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PRICKLE4Q2TBC4 344 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 EIPR1Q53HC9 387 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 ZNF776Q68DI1 518 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 MTFR2Q6P444 385 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 PARM1Q6UWI2 310 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 ENPP7Q6UWV6 458 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 OR4N2Q8NGD1 307 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 OR10G6Q8NH81 332 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 TRMT10AQ8TBZ6 339 aaKnown RBP10.1□□□□□ -0.79
C9orf3-214ENST00000473778 ACOT12Q8WYK0 555 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 SMPDL3BQ92485 455 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 GHSRQ92847 366 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 RFT1Q96AA3 541 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 FAM131CQ96AQ9 280 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 NDC1Q9BTX1 674 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 CAPN10Q9HC96 672 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 KLHL1Q9NR64 748 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 HSPB11Q9Y547 144 aa10.1□□□□□ -0.79
C9orf3-214ENST00000473778 A0A087WV48 116 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 LRRN3E7EW58 273 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 FABP7O15540 132 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 OR2B3O76000 313 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 OR7A10O76100 309 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 MT-ND5P03915 603 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 ATP1B1P05026 303 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 APODP05090 189 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 DBIP07108 87 aaKnown RBP10.09□□□□□ -0.79
C9orf3-214ENST00000473778 CD3GP09693 182 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 LAMP2P13473 410 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 ATF1P18846 271 aa10.09□□□□□ -0.79
C9orf3-214ENST00000473778 HK1P19367 917 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms