RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 DSCAMO60469 2012 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 HEATR5AQ86XA9 2040 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 FAM171A2A8MVW0 826 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 E9PBE3 544 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 HMGN4O00479 90 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 BCAS1O75363 584 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 C1QCP02747 245 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 ALDOCP09972 364 aaKnown RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 IL32P24001 234 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 PTH2RP49190 550 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 DIO1P49895 249 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 UFM1P61960 85 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 KCNJ10P78508 379 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 RASGEF1BQ0VAM2 473 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 TAB1Q15750 504 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 SYT14P1Q58G82 188 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 NCMAPQ5T1S8 102 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 Q6ZT83 130 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 SPATA19Q7Z5L4 167 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF619Q8N2I2 560 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 LILRB1Q8NHL6 650 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 RAB3IL1Q8TBN0 382 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 SLC25A43Q8WUT9 341 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 TMEM171Q8WVE6 324 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 KISS1RQ969F8 398 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 EXOSC3Q9NQT5 275 aaKnown RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-203ENST00000472892 ROS1P08922 2347 aa13.56□□□□□ -0.24
VTI1A-203ENST00000472892 CCDC154A6NI56 674 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 C9JVG2 144 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 H7C1Q1 480 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 SULT2B1O00204 365 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 SDHDO14521 159 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 CNOT4O95628 575 aaKnown RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 HEXAP06865 529 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 FKBP2P26885 142 aaKnown RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 IL12AP29459 219 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 CHI3L1P36222 383 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 KHKP50053 298 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 CHRNEQ04844 493 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 PDK3Q15120 406 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ALKBH2Q6NS38 261 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 SEZ6L2Q6UXD5 910 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 AKAP1Q92667 903 aaKnown RBP eCLIP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF775Q96BV0 537 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF300Q96RE9 604 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 NGBQ9NPG2 151 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-203ENST00000472892 AIG1Q9NVV5 245 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 PRSS50Q9UI38 385 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 LIPT1Q9Y234 373 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 GPR45Q9Y5Y3 372 aa13.55□□□□□ -0.24
VTI1A-203ENST00000472892 PRR14LQ5THK1 2151 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 IGKV3D-15A0A087WSY6 115 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 ADAM11O75078 769 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 LY6G6DO95868 133 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 PGRP06401 933 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 FESP07332 822 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 EDNRAP25101 427 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 RYKP34925 604 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 CLK1P49759 484 aaKnown RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 NME5P56597 212 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 TXNL4AP83876 142 aaKnown RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 PLAURQ03405 335 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 LRRC74AQ0VAA2 488 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 GPAT3Q53EU6 434 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 HHATQ5VTY9 493 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 BHLHA15Q7RTS1 189 aaPredicted RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 TRIML2Q8N7C3 387 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 ANKFN1Q8N957 763 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 ZNF563Q8TA94 476 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 PIWIL2Q8TC59 973 aaKnown RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 OR52E6Q96RD3 313 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 POTEKPQ9BYX7 375 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 CTPS2Q9NRF8 586 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 THAP1Q9NVV9 213 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 CHRNA9Q9UGM1 479 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 RNF115Q9Y4L5 304 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 SPIN1Q9Y657 262 aaPredicted RBP13.54□□□□□ -0.24
VTI1A-203ENST00000472892 FREM1Q5H8C1 2179 aa13.54□□□□□ -0.24
VTI1A-203ENST00000472892 NAV3Q8IVL0 2385 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 TRIM64A6NGJ6 449 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 TRIM64BA6NI03 449 aa13.53□□□□□ -0.24
VTI1A-203ENST00000472892 AGAP5A6NIR3 686 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms