RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GPAT3Q53EU6 434 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 C10orf120Q5SQS8 335 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SAPCD1Q5SSQ6 148 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 THEM4Q5T1C6 240 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CLEC6AQ6EIG7 209 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PPP1R2P3Q6NXS1 205 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 BLOC1S2Q6QNY1 142 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CD164L2Q6UWJ8 174 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 ST13P4Q8IZP2 240 aaPredicted RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 ANKFN1Q8N957 763 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 STEAP2Q8NFT2 490 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 OR2T34Q8NGX1 318 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 OR52J3Q8NH60 311 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PHOSPHO2Q8TCD6 241 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SCFD1Q8WVM8 642 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 OR1E3Q8WZA6 343 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 IL22RA2Q969J5 263 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 TMA16Q96EY4 203 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 CXorf58Q96LI9 332 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SAMD8Q96LT4 415 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 ALS2CR12Q96Q35 445 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PANX2Q96RD6 677 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 FRMD8P1Q9BZ68 369 aaPredicted RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 TRIM4Q9C037 500 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 HDHD2Q9H0R4 259 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 Q9H3A6 140 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 NTN4Q9HB63 628 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 SYTL2Q9HCH5 934 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PALMDQ9NP74 551 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 TREM1Q9NP99 234 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 NGBQ9NPG2 151 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 C8orf4Q9NR00 106 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PAQR5Q9NXK6 330 aaPredicted RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 CNIH4Q9P003 139 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 DNPEPQ9ULA0 475 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 CHMP2BQ9UQN3 213 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 MRPS7Q9Y2R9 242 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 TDRKHQ9Y2W6 561 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 NACADO15069 1562 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 HECW2Q9P2P5 1572 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 ROCK2O75116 1388 aaKnown RBP2.74□□□□□ -1.97
CD46-213ENST00000471987 CHD4Q14839 1912 aa2.74□□□□□ -1.97
CD46-213ENST00000471987 PHLPP2Q6ZVD8 1323 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RIMBP3CA6NJZ7 1639 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RIMBP3BA6NNM3 1639 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RIMBP3Q9UFD9 1639 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8QA0A0J9YX86 632 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 A0A0U1RQS6 177 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 TMEM210A6NLX4 147 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 F8WDY8 70 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 XPO1O14980 1071 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 RRP8O43159 456 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 TRAPPC3O43617 180 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 LRP3O75074 770 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ECI2O75521 394 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RHOBTB1O94844 696 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 CDK14O94921 469 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 WISP3O95389 354 aaPredicted RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 SLC16A8O95907 504 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 MT-ATP6P00846 226 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 TGFAP01135 160 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 APOA1P02647 267 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 PCCBP05166 539 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 CRYGCP07315 174 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 IGFBP1P08833 259 aaPredicted RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 CTRB1P17538 263 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 CALB2P22676 271 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 CCNE1P24864 410 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 PSMA2P25787 234 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 PTPN6P29350 595 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 OTX2P32243 289 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RANBP1P43487 201 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 CCT3P49368 545 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 TUFMP49411 452 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 NME5P56597 212 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RAB14P61106 215 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ZNF45Q02386 682 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ZNF85Q03923 595 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 FADDQ13158 208 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 TSTA3Q13630 321 aaPredicted RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 IL18Q14116 193 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 KARSQ15046 597 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 KCTD19Q17RG1 926 aaPredicted RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 KLHL40Q2TBA0 621 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 CCDC153Q494R4 210 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 HSP90AA4PQ58FG1 418 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 TTMPQ5BVD1 217 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 TCHHL1Q5QJ38 904 aaPredicted RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 RTL6Q6ICC9 239 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ASRGL1Q7L266 308 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 LRRC70Q7Z2Q7 622 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 EFL1Q7Z2Z2 1120 aaKnown RBP2.73□□□□□ -1.97
CD46-213ENST00000471987 SYVN1Q86TM6 617 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 AMZ2Q86W34 360 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 FNDC8Q8TC99 324 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ST7LQ8TDW4 575 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 UBTD2Q8WUN7 234 aa2.73□□□□□ -1.97
CD46-213ENST00000471987 ASZ1Q8WWH4 475 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms