RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ZIM2Q9NZV7 527 aa16.76■□□□□ 0.27
COMMD1-207ENST00000471704 USH1CQ9Y6N9 552 aa16.76■□□□□ 0.27
COMMD1-207ENST00000471704 FN1P02751 2386 aaKnown RBP16.75■□□□□ 0.27
COMMD1-207ENST00000471704 GJE1A6NN92 205 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 SMPD2O60906 423 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 IL6P05231 212 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 PGCP20142 388 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 RPS4Y1P22090 263 aaKnown RBP16.75■□□□□ 0.27
COMMD1-207ENST00000471704 KCNJ10P78508 379 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 C3orf33Q6P1S2 294 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 PRSS57Q6UWY2 283 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 C20orf204Q6ZNR8 217 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 FCRLAQ7L513 359 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 TUSC5Q8IXB3 177 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 TRIML2Q8N7C3 387 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 IGFBPL1Q8WX77 278 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 CNOT9Q92600 299 aaKnown RBP16.75■□□□□ 0.27
COMMD1-207ENST00000471704 ATP6V1G3Q96LB4 118 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 C7orf26Q96N11 449 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 TRNT1Q96Q11 434 aaKnown RBP16.75■□□□□ 0.27
COMMD1-207ENST00000471704 CCDC106Q9BWC9 280 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 UBTD1Q9HAC8 227 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 ACER3Q9NUN7 267 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 SLC35A3Q9Y2D2 325 aa16.75■□□□□ 0.27
COMMD1-207ENST00000471704 RFXANKO14593 260 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 AP3D1O14617 1153 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 SMAD9O15198 467 aaKnown RBP16.74■□□□□ 0.27
COMMD1-207ENST00000471704 UBDO15205 165 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 LRRC74AQ0VAA2 488 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 MERTKQ12866 999 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 Q5PR19 223 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 LRRC74BQ6ZQY2 392 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 VPS33AQ96AX1 596 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 PSD2Q9BQI7 771 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 EBF4Q9BQW3 602 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 EXOSC3Q9NQT5 275 aaKnown RBP16.74■□□□□ 0.27
COMMD1-207ENST00000471704 CTPS2Q9NRF8 586 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 KLHL13Q9P2N7 655 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 USF3Q68DE3 2245 aa16.74■□□□□ 0.27
COMMD1-207ENST00000471704 CSPG4Q6UVK1 2322 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 AGAP5A6NIR3 686 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 ETFAP13804 333 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 HOXB9P17482 250 aaPredicted RBP16.73■□□□□ 0.27
COMMD1-207ENST00000471704 SLC7A1P30825 629 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 POLR2JP52435 117 aaKnown RBP16.73■□□□□ 0.27
COMMD1-207ENST00000471704 RAC3P60763 192 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 LTBQ06643 244 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 RNPS1Q15287 305 aaKnown RBP16.73■□□□□ 0.27
COMMD1-207ENST00000471704 TFAP2EQ6VUC0 442 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 P3H2Q8IVL5 708 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 AURKBQ96GD4 344 aaPredicted RBP16.73■□□□□ 0.27
COMMD1-207ENST00000471704 OR5B2Q96R09 309 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 CCL19Q99731 98 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 OR10A4Q9H209 315 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 TIGARQ9NQ88 270 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.73■□□□□ 0.27
COMMD1-207ENST00000471704 LIPT1Q9Y234 373 aa16.73■□□□□ 0.27
COMMD1-207ENST00000471704 DSPPQ9NZW4 1301 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GCM2O75603 506 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 PRKD3O94806 890 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 ZCCHC18P0CG32 403 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 PSMB1P20618 241 aaKnown RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 EDNRAP25101 427 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 ADSLP30566 484 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 RYKP34925 604 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 TXNL4AP83876 142 aaKnown RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 HPCAP84074 193 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 SYT14P1Q58G82 188 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 BEX5Q5H9J7 111 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GTF2IRD2BQ6EKJ0 949 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 MSANTD1Q6ZTZ1 278 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GTF2IRD2Q86UP8 949 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GABRG1Q8N1C3 465 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 TMEM234Q8WY98 164 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GTF2H4Q92759 462 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 DNAJA3Q96EY1 480 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 ZNF300Q96RE9 604 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-207ENST00000471704 TMEM204Q9BSN7 226 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 BCO1Q9HAY6 547 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 GPR52Q9Y2T5 361 aa16.72■□□□□ 0.27
COMMD1-207ENST00000471704 CYTIPO60759 359 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 KRT75O95678 551 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 PABPC4LP0CB38 370 aaKnown RBP16.71■□□□□ 0.27
COMMD1-207ENST00000471704 PAX1P15863 534 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 MRPL19P49406 292 aaKnown RBP16.71■□□□□ 0.27
COMMD1-207ENST00000471704 DIO1P49895 249 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 IDH3AP50213 366 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 TSC22D1Q15714 1073 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 TMEM201Q5SNT2 666 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 SLC2A7Q6PXP3 512 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 STK32CQ86UX6 486 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 ADGRG3Q86Y34 549 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 FUNDC1Q8IVP5 155 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 MIER2Q8N344 545 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 CIARTQ8N365 385 aaPredicted RBP16.71■□□□□ 0.27
COMMD1-207ENST00000471704 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
COMMD1-207ENST00000471704 ZNF563Q8TA94 476 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms