RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 WDR60Q8WVS4 1066 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 OR52B2Q96RD2 323 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 SRXN1Q9BYN0 137 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 OR10A4Q9H209 315 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 CXXC4Q9H2H0 198 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 TCF7L2Q9NQB0 619 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 CHRNA9Q9UGM1 479 aa13.3□□□□□ -0.28
HOXB3-206ENST00000471459 PCNX3Q9H6A9 2034 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 CENPVL1A0A0U1RR11 272 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 HMGB1P1B2RPK0 211 aaPredicted RBP13.29□□□□□ -0.28
HOXB3-206ENST00000471459 CD99P14209 185 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 IL32P24001 234 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 IDH2P48735 452 aaKnown RBP13.29□□□□□ -0.28
HOXB3-206ENST00000471459 DIO1P49895 249 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 MAP2K6P52564 334 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 CRISP3P54108 245 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 NR1H2P55055 460 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 FUT5Q11128 374 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 LARS2Q15031 903 aaKnown RBP13.29□□□□□ -0.28
HOXB3-206ENST00000471459 P2RY6Q15077 328 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 DEFB113Q30KQ7 82 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 BEX5Q5H9J7 111 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 DNAJC14Q6Y2X3 702 aaPredicted RBP13.29□□□□□ -0.28
HOXB3-206ENST00000471459 STAC2Q6ZMT1 411 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 FAM71CQ8NEG0 241 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 PIGTQ969N2 578 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 ACTR6Q9GZN1 396 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 INTS9Q9NV88 658 aaKnown RBP13.29□□□□□ -0.28
HOXB3-206ENST00000471459 EMC3Q9P0I2 261 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 HDGFL3Q9Y3E1 203 aa13.29□□□□□ -0.28
HOXB3-206ENST00000471459 CFAP73A6NFT4 308 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 ATE1O95260 518 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 NID1P14543 1247 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 PSMB1P20618 241 aaKnown RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 POLR2HP52434 150 aaKnown RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 DSTNP60981 165 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 COPZ1P61923 177 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 IRX1P78414 480 aaPredicted RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 COX20Q5RI15 118 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 MTDHQ86UE4 582 aaKnown RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 ZNF100Q8IYN0 542 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 CNOT9Q92600 299 aaKnown RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 VPS33AQ96AX1 596 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 DDIT4LQ96D03 193 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 CCDC28BQ9BUN5 200 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 CCDC106Q9BWC9 280 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 SLC38A1Q9H2H9 487 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 COQ10BQ9H8M1 238 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 CTPS2Q9NRF8 586 aa13.28□□□□□ -0.28
HOXB3-206ENST00000471459 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
HOXB3-206ENST00000471459 CSMD2Q7Z408 3487 aa13.27□□□□□ -0.28
HOXB3-206ENST00000471459 IGHV3-15A0A0B4J1V0 119 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 PRAMEF27A3QJZ7 478 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 ZNF724A8MTY0 619 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 DEFB108AA8MXU0 73 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 GPR171O14626 319 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 ARHGEF9O43307 516 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 DNPH1O43598 174 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 CYTIPO60759 359 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
HOXB3-206ENST00000471459 CHRM4P08173 479 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 ETFAP13804 333 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 CCNA2P20248 432 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 SLC1A3P43003 542 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 IDH3AP50213 366 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 LIN52Q52LA3 116 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 NUFIP2Q7Z417 695 aaKnown RBP13.27□□□□□ -0.29
HOXB3-206ENST00000471459 MAVSQ7Z434 540 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 CXorf67Q86X51 503 aaPredicted RBP13.27□□□□□ -0.29
HOXB3-206ENST00000471459 WFDC8Q8IUA0 241 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 TGIF2LYQ8IUE0 185 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 OR52P1PQ8NH57 321 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 HSD17B8Q92506 261 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 KISS1RQ969F8 398 aaPredicted RBP13.27□□□□□ -0.29
HOXB3-206ENST00000471459 RABEP2Q9H5N1 569 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 BCO1Q9HAY6 547 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 TRAPPC4Q9Y296 219 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 IFT52Q9Y366 437 aa13.27□□□□□ -0.29
HOXB3-206ENST00000471459 TMED7-TICAM2A0A0A6YYA0 188 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 CLDN24A6NM45 220 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 CLIC1O00299 241 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 FAAHO00519 579 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 ZNF208O43345 1280 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 EIF1BO60739 113 aaKnown RBP13.26□□□□□ -0.29
HOXB3-206ENST00000471459 PMS2P2O95744 297 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 F8P00451 2351 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 ADAP00813 363 aa13.26□□□□□ -0.29
HOXB3-206ENST00000471459 BCHEP06276 602 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms