RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MEDAGQ5VYS4 303 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 TMEM81Q6P7N7 255 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OPN5Q6U736 354 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 RAB43Q86YS6 212 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 IQCF1Q8N6M8 205 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OR2T33Q8NG76 320 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OR52L1Q8NGH7 329 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OR5M3Q8NGP4 307 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OR13C2Q8NGS9 318 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ZNF563Q8TA94 476 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 FANK1Q8TC84 345 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SGTBQ96EQ0 304 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 Q96MT0 163 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SLC38A2Q96QD8 506 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SIGLEC11Q96RL6 698 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SECISBP2Q96T21 854 aaKnown RBP8.56□□□□□ -1.04
VPS52-216ENST00000471309 TEX12Q9BXU0 123 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ADAM19Q9H013 955 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 OR52D1Q9H346 318 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 VCX3AQ9NNX9 186 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 MED17Q9NVC6 651 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 FKBP14Q9NWM8 211 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 CLN6Q9NWW5 311 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 KLRF1Q9NZS2 232 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 NDUFA13Q9P0J0 144 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 AASSQ9UDR5 926 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 FBXL4Q9UKA2 621 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SIGLEC7Q9Y286 467 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 YARS2Q9Y2Z4 477 aaKnown RBP8.56□□□□□ -1.04
VPS52-216ENST00000471309 PCDHGB6Q9Y5F9 930 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SNX5Q9Y5X3 404 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 PCSK5Q92824 1860 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 MYO15AQ9UKN7 3530 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SEC16AO15027 2179 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 DMDP11532 3685 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CACNA1HO95180 2353 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 C17orf51A8MQB3 221 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CDRT15L2A8MXV6 281 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 M0R129 80 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TP53I11O14683 189 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TM4SF5O14894 197 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 RGS10O43665 173 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 PRKYO43930 277 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SERPINA7P05543 415 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SAGP10523 405 aaPredicted RBP8.55□□□□□ -1.04
VPS52-216ENST00000471309 GP1BBP13224 206 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
VPS52-216ENST00000471309 BMP7P18075 431 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 MSX1P28360 303 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TACR3P29371 465 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 GRK5P34947 590 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 PTGDSP41222 190 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SOX3P41225 446 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 HTR3AP46098 478 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SSR4P51571 173 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 DLX5P56178 289 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 MLF1P58340 268 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 FXYD6P3P58550 94 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 EFNB1P98172 346 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CRYZQ08257 329 aaKnown RBP8.55□□□□□ -1.04
VPS52-216ENST00000471309 SNTA1Q13424 505 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 IL10RAQ13651 578 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 QPRTQ15274 297 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 OCLNQ16625 522 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 COL28A1Q2UY09 1125 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 H3F3CQ6NXT2 135 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SMARCD3Q6STE5 483 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 PRSS48Q7RTY5 328 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 GRINAQ7Z429 371 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SATL1Q86VE3 508 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SPARTQ8N0X7 666 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 FAM26EQ8N5C1 309 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 OR10G3Q8NGC4 313 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 OR4Q3Q8NH05 313 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 GPR119Q8TDV5 335 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 ADAMTS17Q8TE56 1095 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TMEM234Q8WY98 164 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 ST8SIA1Q92185 356 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 FGF11Q92914 225 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 KLHDC3Q9BQ90 382 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TSSK6Q9BXA6 273 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 METTL7AQ9H8H3 244 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CPNE5Q9HCH3 593 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 SDHAF3Q9NRP4 125 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 P4HTMQ9NXG6 502 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TAS2R10Q9NYW0 307 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 TVP23BQ9NYZ1 205 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CNOT2Q9NZN8 540 aaKnown RBP8.55□□□□□ -1.04
VPS52-216ENST00000471309 PSORS1C1Q9UIG5 152 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 PCDHGB1Q9Y5G3 927 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 WIF1Q9Y5W5 379 aa8.55□□□□□ -1.04
VPS52-216ENST00000471309 CHCHD2Q9Y6H1 151 aaPredicted RBP8.55□□□□□ -1.04
VPS52-216ENST00000471309 LOC101059948A0A1B0GTJ6 334 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 CLCA1A8K7I4 914 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 PTGES3LE9PB15 166 aa8.54□□□□□ -1.04
VPS52-216ENST00000471309 ETV2O00321 342 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms