RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 METTL9Q9H1A3 318 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MARCH4Q9P2E8 410 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 LIPT1Q9Y234 373 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 MROH6A6NGR9 719 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FCGR2AP12318 317 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HTR3AP46098 478 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HBG1P69891 147 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HBG2P69892 147 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 RAB33AQ14088 237 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ECM1Q16610 540 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF678Q5SXM1 525 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FAM69AQ5T7M9 428 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 VASNQ6EMK4 673 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 CPEB2Q7Z5Q1 589 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 MEX3DQ86XN8 651 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 CYB561A3Q8NBI2 242 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ELP4Q96EB1 424 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SLCO5A1Q9H2Y9 848 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NGBQ9NPG2 151 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NAP1L6A6NFF2 107 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 CDK2AP1O14519 115 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TIA1P31483 386 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HOXD12P35452 270 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 STK19P49842 368 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SUMO1P63165 101 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 MBTPS1Q14703 1052 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 C10orf62Q5T681 223 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SYPL2Q5VXT5 272 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NCBP2-AS2Q69YL0 99 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OR10K2Q6IF99 312 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 VWA1Q6PCB0 445 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ENPP6Q6UWR7 440 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OR4C5Q8NGB2 326 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OR4M1Q8NGD0 313 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GPR148Q8TDV2 347 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 DTD1Q8TEA8 209 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 IRF7Q92985 503 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 DNAJC19Q96DA6 116 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF486Q96H40 463 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TRIB1Q96RU8 372 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SMOQ99835 787 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 BCL7BQ9BQE9 202 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NUDT22Q9BRQ3 303 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 DPH7Q9BTV6 452 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PTRH2Q9Y3E5 179 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HS3ST4Q9Y661 456 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 COL22A1Q8NFW1 1626 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PPH5 198 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SLC22A23A1A5C7 686 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ANKUB1A6NFN9 424 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ANKRD66B4E2M5 251 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NPPAP01160 153 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PTHP01270 115 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HBE1P02100 147 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ITGB8P26012 769 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZXDBP98169 803 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NANOGP8Q6NSW7 305 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 METAP1DQ6UB28 335 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF546Q86UE3 836 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TFAP2BQ92481 460 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF251Q9BRH9 671 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GSTO2Q9H4Y5 243 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GAREM1Q9H706 876 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SCPEP1Q9HB40 452 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ISYNA1Q9NPH2 558 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FAM96BQ9Y3D0 163 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 IER3IP1Q9Y5U9 82 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FUOMA2VDF0 154 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 H0YAE9 185 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GPR39O43194 453 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HPGDSO60760 199 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 LEFTY1O75610 366 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 LYPLA2O95372 231 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HBQ1P09105 142 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 IL1RNP18510 177 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HNRNPA2B1P22626 353 aaKnown RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ACKR3P25106 362 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TAS2R38P59533 333 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 NHSL2Q5HYW2 709 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PLEKHS1Q5SXH7 462 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF551Q7Z340 670 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PLXDC1Q8IUK5 500 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SIGLECL1Q8N7X8 197 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FRMD1Q8N878 549 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF417Q8TAU3 575 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FNDC8Q8TC99 324 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF587Q96SQ5 575 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 LPAR4Q99677 370 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 MCOLN1Q9GZU1 580 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HOXD1Q9GZZ0 328 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 C1orf198Q9H425 327 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GALNT9Q9HCQ5 603 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SLAMF7Q9NQ25 335 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 B4GALT6Q9UBX8 382 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms