RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SPARTQ8N0X7 666 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 TAGAPQ8N103 731 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 FAM109AQ8N4B1 249 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 RPRMLQ8N4K4 120 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 ADIPOR1Q96A54 375 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 MARVELD3Q96A59 401 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DHRS1Q96LJ7 313 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 JSRP1Q96MG2 331 aaPredicted RBP16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DMRTA2Q96SC8 542 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 SCN3BQ9NY72 215 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 MAT2BQ9NZL9 334 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 ADGRG4Q8IZF6 3080 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DCHS2Q6V1P9 2916 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 APCP25054 2843 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 A0A0G2JPF8 293 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 ENO4A6NNW6 628 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 HNRNPCL2B2RXH8 293 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 HNRNPCL3B7ZW38 293 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 E9PLN8 166 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 SEC14L2O76054 403 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 GADD45GO95257 159 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 ANGPTL1O95841 491 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 ATP1B1P05026 303 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 HNRNPCL4P0DMR1 293 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 OR12D1P0DN82 309 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 TNFRSF1BP20333 461 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 SOX18P35713 384 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 OR1E2P47887 323 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 CRISP3P54108 245 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 CDH12P55289 794 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
MRPL28-208ENST00000469744 DUSP8Q13202 625 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 MAD2L1BPQ15013 274 aaPredicted RBP16.04■□□□□ 0.16
MRPL28-208ENST00000469744 NTRK2Q16620 822 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 EXOC3L2Q2M3D2 409 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 EMC4Q5J8M3 183 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 BICRALQ6AI39 1079 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 PARP8Q8N3A8 854 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 SMYD1Q8NB12 490 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 GPR32P1Q8NGA4 272 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 OR5M9Q8NGP3 310 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 OR13F1Q8NGS4 319 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 RAB8BQ92930 207 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 FEVQ99581 238 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 VKORC1Q9BQB6 163 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 DUSP21Q9H596 190 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 CCNB1IP1Q9NPC3 277 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 CALML5Q9NZT1 146 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 LIPT1Q9Y234 373 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 SH3GLB1Q9Y371 365 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 KLF2Q9Y5W3 355 aaPredicted RBP16.04■□□□□ 0.16
MRPL28-208ENST00000469744 SNX5Q9Y5X3 404 aa16.04■□□□□ 0.16
MRPL28-208ENST00000469744 LRRC3CA6NJW4 275 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 CCNB2O95067 398 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 OXSR1O95747 527 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 RFPL3SP0C7P2 107 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 NR2F1P10589 423 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 PRF1P14222 555 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 CBLP22681 906 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 GGT2P36268 569 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 IL1RL1Q01638 556 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TRMT12Q53H54 448 aaKnown RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 CLVS1Q8IUQ0 354 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 CCDC116Q8IYX3 515 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 LRRC25Q8N386 305 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 OR7G1Q8NGA0 311 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 IPCEF1Q8WWN9 437 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 DIO2Q92813 273 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ELP4Q96EB1 424 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 MPP4Q96JB8 637 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 NODALQ96S42 347 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TREX2Q9BQ50 279 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ITPAQ9BY32 194 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 NXF5Q9H1B4 397 aaKnown RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF556Q9HAH1 456 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ACAD8Q9UKU7 415 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 NPFFR2Q9Y5X5 522 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 FBN2P35556 2912 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 PRAMEF27A3QJZ7 478 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TRIM64BA6NI03 449 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 NME6O75414 186 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 CBX7O95931 251 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 AGR2O95994 175 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 MAP4K2Q12851 820 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 RPS26P11Q5JNZ5 115 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 XAF1Q6GPH4 301 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TRILQ7L0X0 811 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 SLC34A3Q8N130 599 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 OR52R1Q8NGF1 315 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 PHF10Q8WUB8 498 aaKnown RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 XAGE5Q8WWM1 108 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 TP53INP1Q96A56 240 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF703Q9H7S9 590 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 PLCXD1Q9NUJ7 323 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms