RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 EVX1P49640 407 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 RAB38P57729 211 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 CCDC85BQ15834 202 aaPredicted RBP17.58■□□□□ 0.41
VIM-203ENST00000469543 ARMC6Q6NXE6 501 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 TOR1AIP2Q8NFQ8 470 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 OR5M3Q8NGP4 307 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 UBASH3BQ8TF42 649 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 DDX28Q9NUL7 540 aaKnown RBP17.58■□□□□ 0.41
VIM-203ENST00000469543 ZNF346Q9UL40 294 aaKnown RBP17.58■□□□□ 0.41
VIM-203ENST00000469543 CLDN16Q9Y5I7 305 aa17.58■□□□□ 0.41
VIM-203ENST00000469543 FAM86C2PA6NEL3 165 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.58■□□□□ 0.4
VIM-203ENST00000469543 RCBTB2O95199 551 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 HIST1H1CP16403 213 aaKnown RBP17.58■□□□□ 0.4
VIM-203ENST00000469543 PYCR1P32322 319 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 ZNF85Q03923 595 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 SETD6Q8TBK2 473 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 AP3S1Q92572 193 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 ST6GAL2Q96JF0 529 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 ERMAPQ96PL5 475 aaPredicted RBP17.58■□□□□ 0.4
VIM-203ENST00000469543 KLHDC3Q9BQ90 382 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 TTYH2Q9BSA4 534 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 POMT2Q9UKY4 750 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 ERVK-19Q9WJR5 959 aa17.58■□□□□ 0.4
VIM-203ENST00000469543 A0A0G2JMP0 313 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 A0A0X1KG70 313 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 FAM171A2A8MVW0 826 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 SBK2P0C263 348 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 CT45A8P0DMV1 189 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 CT45A9P0DMV2 189 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 NAA10P41227 235 aaPredicted RBP17.57■□□□□ 0.4
VIM-203ENST00000469543 RAB25P57735 213 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 TBRG1Q3YBR2 411 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 TP53I3Q53FA7 332 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 CT45A2Q5DJT8 189 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 OR4M2Q8NGB6 313 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 ZPLD1Q8TCW7 415 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 SMPDL3BQ92485 455 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 EFHD2Q96C19 240 aaPredicted RBP17.57■□□□□ 0.4
VIM-203ENST00000469543 ZNF524Q96C55 264 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 ORAI1Q96D31 301 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 VSTM2LQ96N03 204 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 SEMA6CQ9H3T2 930 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 UNC13CQ8NB66 2214 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 A0A0B4J203 849 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 KIR2DS5A0A0G2JLQ3 304 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 A0A0G2JNG1 304 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 C17orf51A8MQB3 221 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 MCIDASD6RGH6 385 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 KIR2DS3K7RE56 304 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 LANCL1O43813 399 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 PSKH1P11801 424 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 HOXD12P35452 270 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 GALEQ14376 348 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 KIR2DS5Q14953 304 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 PRAMEF17Q5VTA0 474 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 FAAH2Q6GMR7 532 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 GID4Q8IVV7 300 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 ZNF321PQ8N8H1 164 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 GDPD1Q8N9F7 314 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 C19orf47Q8N9M1 422 aaKnown RBP17.57■□□□□ 0.4
VIM-203ENST00000469543 C16orf52Q8NHV5 167 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 ZNF486Q96H40 463 aaPredicted RBP17.57■□□□□ 0.4
VIM-203ENST00000469543 FREM2Q5SZK8 3169 aa17.57■□□□□ 0.4
VIM-203ENST00000469543 A0A1W2PRG6 482 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 FAM25AB3EWG3 89 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 FAM25CB3EWG5 89 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 FAM25GB3EWG6 89 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 CHP2O43745 196 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 GFERP55789 205 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 ACSM1Q08AH1 577 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 ASAH1Q13510 395 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 KCNAB1Q14722 419 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 NKAIN2Q5VXU1 208 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 BMPERQ8N8U9 685 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 SLC22A4Q9H015 551 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 RANGRFQ9HD47 186 aaPredicted RBP17.56■□□□□ 0.4
VIM-203ENST00000469543 KLHL1Q9NR64 748 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 NLKQ9UBE8 527 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 SLC35A3Q9Y2D2 325 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 KRT8P05787 483 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 TCEA1P23193 301 aaKnown RBP17.56■□□□□ 0.4
VIM-203ENST00000469543 SLC25A35Q3KQZ1 300 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 KIAA0895LQ68EN5 471 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 ZNF544Q6NX49 715 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 CEACAM19Q7Z692 300 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 MMABQ96EY8 250 aaPredicted RBP17.56■□□□□ 0.4
VIM-203ENST00000469543 SOSTQ9BQB4 213 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 WACQ9BTA9 647 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 ZNF221Q9UK13 617 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 IER3IP1Q9Y5U9 82 aa17.56■□□□□ 0.4
VIM-203ENST00000469543 A0A087WV48 116 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 RIIAD1A6NNX1 92 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 TFP02787 698 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 IFNA16P05015 189 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 TFPIP10646 304 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 SLC2A5P22732 501 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 TMEM53Q6P2H8 277 aa17.55■□□□□ 0.4
VIM-203ENST00000469543 ZNF613Q6PF04 617 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms