RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CBFBQ13951 182 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CD226Q15762 336 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TIGD6Q17RP2 521 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TIMM50Q3ZCQ8 353 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CLEC12AQ5QGZ9 265 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 DCAF12Q5T6F0 453 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 NXNL2Q5VZ03 156 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ACSM5Q6NUN0 579 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 SLC30A6Q6NXT4 461 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 FAM198BQ6UWH4 519 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 NUP54Q7Z3B4 507 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 OAFQ86UD1 273 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 PRR22Q8IZ63 422 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 GALNT15Q8N3T1 639 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 LNX2Q8N448 690 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 GATSQ8NAP1 163 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 APCDD1LQ8NCL9 501 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 OR13C2Q8NGS9 318 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 OR4Q3Q8NH05 313 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF563Q8TA94 476 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TMCO6Q96DC7 493 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 YIPF6Q96EC8 236 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 LIN37Q96GY3 246 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 SAMD8Q96LT4 415 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CTRCQ99895 268 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 EDEM2Q9BV94 578 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 IFT27Q9BW83 186 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 UBQLN3Q9H347 655 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 AMBNQ9NP70 447 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TIMMDC1Q9NPL8 285 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM9BQ9NQ34 198 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 MEPEQ9NQ76 525 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CHCHD3Q9NX63 227 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 H2AFY2Q9P0M6 372 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 DIMT1Q9UNQ2 313 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ERGIC3Q9Y282 383 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 SIGLEC7Q9Y286 467 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CARD8Q9Y2G2 431 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 EXOSC1Q9Y3B2 195 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 PCDHGB6Q9Y5F9 930 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 NPFFR2Q9Y5X5 522 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 GPR179Q6PRD1 2367 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 RIF1Q5UIP0 2472 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 OTOGLQ3ZCN5 2332 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 LOC102723996A0A087X1L8 192 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 IGHV3-20A0A0C4DH32 117 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 CDC14CA4D256 554 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 TRIM64BA6NI03 449 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 AGRPO00253 132 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 BHLHE40O14503 412 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 HCRTR2O43614 444 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 ZFAND5O76080 213 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 OR7A10O76100 309 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 NDUFB2O95178 105 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 NTN1O95631 604 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 GP1BBP13224 206 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF3P17036 446 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 PAICSP22234 425 aaKnown RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 C21orf33P30042 268 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 FOLR3P41439 243 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 SLC1A3P43003 542 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 HTR3AP46098 478 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 MTNR1AP48039 350 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 P2RX1P51575 399 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 EFNB1P98172 346 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 EIF3IQ13347 325 aaKnown RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 EXT1Q16394 746 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 NDUFAF6Q330K2 333 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 C3orf38Q5JPI3 329 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 RTL4Q6ZR62 310 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 CXXC5Q7LFL8 322 aaKnown RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 ATG4DQ86TL0 474 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 MEX3DQ86XN8 651 aaKnown RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 SLC15A4Q8N697 577 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 OR9Q1Q8NGQ5 310 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 TTC9Q92623 222 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 DDA1Q9BW61 102 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 FGF20Q9NP95 211 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 CMC2Q9NRP2 79 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 C20orf141Q9NUB4 165 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 MRPS18AQ9NVS2 196 aaKnown RBP8.55□□□□□ -1.04
SMC1A-205ENST00000469129 KLHL21Q9UJP4 597 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 SLC6A5Q9Y345 797 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF337Q9Y3M9 751 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 LOXL2Q9Y4K0 774 aa8.55□□□□□ -1.04
SMC1A-205ENST00000469129 SLC22A31A6NKX4 558 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PRR23D1E9PI22 279 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 SCO2O43819 266 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 FADS1O60427 444 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ADAM11O75078 769 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 SLC25A12O75746 678 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 NUDT14O95848 222 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 BCL10O95999 233 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PTHP01270 115 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 LCKP06239 509 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PRR23D2P0DMB1 279 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms