RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CYBRD1Q53TN4 286 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF311Q5JNZ3 666 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 DCST2Q5T1A1 773 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 INTS11Q5TA45 600 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 RIF1Q5UIP0 2472 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 REEP3Q6NUK4 255 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZCCHC12Q6PEW1 402 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 NPSR1Q6W5P4 371 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 Q6YL49 198 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 HSDL2Q6YN16 418 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF517Q6ZMY9 492 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 VRK2Q86Y07 508 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 C9orf40Q8IXQ3 194 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM109AQ8N4B1 249 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SIRT6Q8N6T7 355 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 BCORP1Q8N888 145 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SMYD1Q8NB12 490 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 NFAM1Q8NET5 270 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 OR11G2Q8NGC1 345 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 OR5L2Q8NGL0 311 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 VANGL1Q8TAA9 524 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 M1APQ8TC57 530 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SPPL2AQ8TCT8 520 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC38A5Q8WUX1 472 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 KCNE4Q8WWG9 221 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PYDC1Q8WXC3 89 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FGF11Q92914 225 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 STMN2Q93045 179 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TMBIM1Q969X1 311 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 EFHD2Q96C19 240 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CTHRC1Q96CG8 243 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZG16BQ96DA0 208 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 NXPE2Q96DL1 559 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ASB9Q96DX5 294 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FBXL20Q96IG2 436 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 THOC3Q96J01 351 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 VPS50Q96JG6 964 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 RNF145Q96MT1 663 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 VSTM2LQ96N03 204 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 COL21A1Q96P44 957 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF607Q96SK3 696 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SDF2Q99470 211 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 WDR77Q9BQA1 342 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 LMF2Q9BU23 707 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 EFHD1Q9BUP0 239 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 PTDSS2Q9BVG9 487 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 TRIM15Q9C019 465 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 B3GNT4Q9C0J1 378 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 WWTR1Q9GZV5 400 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF700Q9H0M5 742 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 NXF5Q9H1B4 397 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 CACYBPQ9HB71 228 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 Q9N2J8 555 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 A4GALTQ9NPC4 353 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF223Q9UK11 482 aaPredicted RBP3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 FBXL4Q9UKA2 621 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC13A4Q9UKG4 626 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 LIPT1Q9Y234 373 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 WDR45Q9Y484 360 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 HS3ST3B1Q9Y662 390 aa3.74□□□□□ -1.81
TMEM39A-204ENST00000468545 LAMA1P25391 3075 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 PTPRBP23467 1997 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM186AA6NE01 2351 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 LOC102723996A0A087X1L8 192 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 A0A0G2JPF8 293 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 SYNDIG1LA6NDD5 238 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 OR6C76A6NM76 312 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HNRNPCL2B2RXH8 293 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HNRNPCL3B7ZW38 293 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 GTPBP1O00178 669 aaKnown RBP3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 GNGT2O14610 69 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 ACOT8O14734 319 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 SUV39H1O43463 412 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 ASNA1O43681 348 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HS6ST1O60243 411 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 STX11O75558 287 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 GCM2O75603 506 aaPredicted RBP3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 SERPINB7O75635 380 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 OR2J2O76002 312 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 KRT36O76013 467 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 PDE9AO76083 593 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 UTS2O95399 124 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 PSMG1O95456 288 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HPP00738 406 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 IFNA14P01570 189 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 IGKV1D-16P01601 117 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 MT-ND1P03886 318 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 IGKV3-11P04433 115 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HNRNPCL4P0DMR1 293 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 CT45A8P0DMV1 189 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 CT45A9P0DMV2 189 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 ICAM2P13598 275 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 HPGDP15428 266 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 IL7RP16871 459 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 WT1P19544 449 aaPredicted RBP3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 TNFRSF1BP20333 461 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 DRD5P21918 477 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 IL12BP29460 328 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 PCGF2P35227 344 aa3.73□□□□□ -1.81
TMEM39A-204ENST00000468545 EIF2S3P41091 472 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms