RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 VRK1Q99986 396 aaPredicted RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 BHLHE41Q9C0J9 482 aaPredicted RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 IQCGQ9H095 443 aaKnown RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SLC17A5Q9NRA2 495 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 EMC3Q9P0I2 261 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 NUP214P35658 2090 aaPredicted RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF264O43296 627 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 SDC1P18827 310 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 PRPH2P23942 346 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 CCR4P51679 360 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 MLC1Q15049 377 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 DCST2Q5T1A1 773 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 BHLHB9Q6PI77 547 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 TIFABQ6ZNK6 161 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 CCDC103Q8IW40 242 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 TMCO5AQ8N6Q1 288 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF614Q8N883 585 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 FCRL1Q96LA6 429 aa16.29■□□□□ 0.2
LINC00888-201ENST00000468380 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
LINC00888-201ENST00000468380 ZCCHC3Q9NUD5 404 aaKnown RBP16.29■□□□□ 0.2
LINC00888-201ENST00000468380 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
LINC00888-201ENST00000468380 LILRA1O75019 489 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 MRPL33O75394 65 aaKnown RBP16.28■□□□□ 0.2
LINC00888-201ENST00000468380 STAMBPO95630 424 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 GCAP28676 217 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 CBFBQ13951 182 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 TOR1AIP2Q8NFQ8 470 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 OR2T11Q8NH01 316 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 METTL2AQ96IZ6 378 aaKnown RBP16.28■□□□□ 0.2
LINC00888-201ENST00000468380 ARL5BQ96KC2 179 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 MYOZ1Q9NP98 299 aaPredicted RBP16.28■□□□□ 0.2
LINC00888-201ENST00000468380 C1orf109Q9NX04 203 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 KCNE5Q9UJ90 142 aa16.28■□□□□ 0.2
LINC00888-201ENST00000468380 PKD1L1Q8TDX9 2849 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SERPINF1P36955 418 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SLC16A1P53985 500 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.2
LINC00888-201ENST00000468380 MERTKQ12866 999 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SKP2Q13309 424 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 RFTN2Q52LD8 501 aaPredicted RBP16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SYT14P1Q58G82 188 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 PDZK1Q5T2W1 519 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF540Q8NDQ6 660 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SEMA6DQ8NFY4 1073 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 CCT7Q99832 543 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 ACTRT3Q9BYD9 372 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 LAT2Q9GZY6 243 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 OCEL1Q9H607 264 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SERINC1Q9NRX5 453 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 SLC7A10Q9NS82 523 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 GPATCH2Q9NW75 528 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 TGP01266 2768 aa16.27■□□□□ 0.2
LINC00888-201ENST00000468380 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 G3V2L1 256 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 TACSTD2P09758 323 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 UBL4AP11441 157 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 COMPP49747 757 aaPredicted RBP16.26■□□□□ 0.19
LINC00888-201ENST00000468380 SNRPD2P62316 118 aaKnown RBP16.26■□□□□ 0.19
LINC00888-201ENST00000468380 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 SLC46A3Q7Z3Q1 461 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 LINC01356Q8N9X3 169 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 ADAMTS15Q8TE58 950 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 ST8SIA1Q92185 356 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 ARL8AQ96BM9 186 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 METRNQ9UJH8 293 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 DCTN4Q9UJW0 460 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 EMCNQ9ULC0 261 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 AMDHD2Q9Y303 409 aa16.26■□□□□ 0.19
LINC00888-201ENST00000468380 SERINC4A6NH21 518 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 GPR171O14626 319 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 KLF11O14901 512 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 CYP7B1O75881 506 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 TFPIP10646 304 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 GIFP27352 417 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 CCT3P49368 545 aaKnown RBP16.25■□□□□ 0.19
LINC00888-201ENST00000468380 TSPO2Q5TGU0 170 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 FRMD7Q6ZUT3 714 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 OLIG3Q7RTU3 272 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 C17orf78Q8N4C9 275 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 C1orf162Q8NEQ5 155 aaPredicted RBP16.25■□□□□ 0.19
LINC00888-201ENST00000468380 SGMS2Q8NHU3 365 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 SDF2Q99470 211 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 CCDC106Q9BWC9 280 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 ACER3Q9NUN7 267 aa16.25■□□□□ 0.19
LINC00888-201ENST00000468380 BCAS1O75363 584 aaPredicted RBP16.24■□□□□ 0.19
LINC00888-201ENST00000468380 CRCPO75575 148 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 PMS2P2O95744 297 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 GSTA1P08263 222 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 UROSP10746 265 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 APEX1P27695 318 aaKnown RBP16.24■□□□□ 0.19
LINC00888-201ENST00000468380 CHN2P52757 468 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 CDH15P55291 814 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 PRPS1P60891 318 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 H3F3AP84243 136 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 ADIPOQQ15848 244 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 CASP12Q6UXS9 341 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 RINLQ6ZS11 566 aa16.24■□□□□ 0.19
LINC00888-201ENST00000468380 ZNF572Q7Z3I7 529 aaPredicted RBP16.24■□□□□ 0.19
LINC00888-201ENST00000468380 SPATA19Q7Z5L4 167 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms