RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FRRS1Q6ZNA5 592 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 TMPPEQ6ZT21 453 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 EIF3MQ7L2H7 374 aaKnown RBP21.67■■□□□ 1.06
PTCH1-210ENST00000468211 PRIMA1Q86XR5 153 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 TESCQ96BS2 214 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 ROPN1LQ96C74 230 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 DNAJA3Q96EY1 480 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 POTEKPQ9BYX7 375 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 NUF2Q9BZD4 464 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 ESRP2Q9H6T0 727 aaKnown RBP21.67■■□□□ 1.06
PTCH1-210ENST00000468211 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.67■■□□□ 1.06
PTCH1-210ENST00000468211 WDR45Q9Y484 360 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 CLDN24A6NM45 220 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 OVOL3O00110 214 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 RGS16O15492 202 aaPredicted RBP21.66■■□□□ 1.06
PTCH1-210ENST00000468211 ADAM11O75078 769 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 CD3EP07766 207 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 DANCRP0C864 163 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 PGCP20142 388 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 RPS4XP62701 263 aaKnown RBP21.66■■□□□ 1.06
PTCH1-210ENST00000468211 CASP8Q14790 479 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 SYT14P1Q58G82 188 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 KBTBD8Q8NFY9 601 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 TMEM234Q8WY98 164 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 TEX37Q96LM6 180 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 CCDC106Q9BWC9 280 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 SAP130Q9H0E3 1048 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 CTPS2Q9NRF8 586 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 PNPOQ9NVS9 261 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 HAO1Q9UJM8 370 aa21.66■■□□□ 1.06
PTCH1-210ENST00000468211 ZNF724A8MTY0 619 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 SULT2B1O00204 365 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 TMCC2O75069 709 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 IGHV1-2P23083 117 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 RYKP34925 604 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 TNK1Q13470 666 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 AP1ARQ63HQ0 302 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 FBXW5Q969U6 566 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 NEURL3Q96EH8 262 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 ARL5BQ96KC2 179 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 SSU72Q9NP77 194 aaKnown RBP21.65■■□□□ 1.06
PTCH1-210ENST00000468211 SERINC1Q9NRX5 453 aa21.65■■□□□ 1.06
PTCH1-210ENST00000468211 INAFM1C9JVW0 142 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 RAMP1O60894 148 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 GUSBP08236 651 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 LBPP18428 481 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 NTF4P34130 210 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 NME5P56597 212 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 CHRNEQ04844 493 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 STK11Q15831 433 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 FAM174BQ3ZCQ3 159 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 ZNF672Q499Z4 452 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-210ENST00000468211 ATAD3BQ5T9A4 648 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 ANXA8L1Q5VT79 327 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 ABLIM2Q6H8Q1 611 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 SMAP2Q8WU79 429 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-210ENST00000468211 ARL8AQ96BM9 186 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 NGBQ9NPG2 151 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 POLE3Q9NRF9 147 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 NPAP1Q9NZP6 1156 aa21.64■■□□□ 1.05
PTCH1-210ENST00000468211 MAGED1Q9Y5V3 778 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-210ENST00000468211 HMGN4O00479 90 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 TM9SF1O15321 606 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 AGR2O95994 175 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 ALDOCP09972 364 aaKnown RBP21.63■■□□□ 1.05
PTCH1-210ENST00000468211 TFPIP10646 304 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 COX5AP20674 150 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 CDKN1AP38936 164 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 UFM1P61960 85 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 KRTAP1-1Q07627 177 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 PGGHGQ32M88 737 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 TNFAIP8L3Q5GJ75 292 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 GALNT5Q7Z7M9 940 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 MTDHQ86UE4 582 aaKnown RBP21.63■■□□□ 1.05
PTCH1-210ENST00000468211 ZNF563Q8TA94 476 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 SLC35A5Q9BS91 424 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 TRIM2Q9C040 744 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 OR11A1Q9GZK7 315 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 MEAF6Q9HAF1 191 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 MARCOQ9UEW3 520 aaPredicted RBP21.63■■□□□ 1.05
PTCH1-210ENST00000468211 CHRNA9Q9UGM1 479 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 SLC35A3Q9Y2D2 325 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 PLCE1Q9P212 2302 aa21.63■■□□□ 1.05
PTCH1-210ENST00000468211 IGKV3D-15A0A087WSY6 115 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 ZNF716A6NP11 495 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 E9PBE3 544 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 IGHV3-9P01782 118 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 CHI3L1P36222 383 aaPredicted RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 APOBEC1P41238 236 aaKnown RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 KHKP50053 298 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 CSNK2A1P68400 391 aaPredicted RBP21.62■■□□□ 1.05
PTCH1-210ENST00000468211 STX3Q13277 289 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 PPA1Q15181 289 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 GPAT3Q53EU6 434 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 ADGRG3Q86Y34 549 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 ZNF100Q8IYN0 542 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 ANKFN1Q8N957 763 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 MAPK1IP1LQ8NDC0 245 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 VPS37AQ8NEZ2 397 aa21.62■■□□□ 1.05
PTCH1-210ENST00000468211 SLC25A43Q8WUT9 341 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms