RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CBLN3Q6UW01 205 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 RTL4Q6ZR62 310 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 RBM45Q8IUH3 476 aaKnown RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 KDF1Q8NAX2 398 aaPredicted RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 VANGL1Q8TAA9 524 aaPredicted RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 OIT3Q8WWZ8 545 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 GEMIN6Q8WXD5 167 aaKnown RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 CNOT9Q92600 299 aaKnown RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 SLCO4A1Q96BD0 722 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 CRELD1Q96HD1 420 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 SH3YL1Q96HL8 342 aaPredicted RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 KCNN2Q9H2S1 579 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 S100A14Q9HCY8 104 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 DNAJB12Q9NXW2 375 aaKnown RBP6.27□□□□□ -1.41
SCAF4-204ENST00000467731 ANAPC2Q9UJX6 822 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 SLC13A4Q9UKG4 626 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 SLC35A3Q9Y2D2 325 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 CSAG2Q9Y5P2 127 aa6.27□□□□□ -1.41
SCAF4-204ENST00000467731 ATRXP46100 2492 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 B4DXG7 233 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 G3V3Y1 287 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 H3BNH8 94 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SYT5O00445 386 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ST8SIA5O15466 376 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF264O43296 627 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 GMFGO60234 142 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ADAM11O75078 769 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SLC25A12O75746 678 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ECDO95905 644 aaPredicted RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 PCSK6P29122 969 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SLC9A3P48764 834 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 GAS1P54826 345 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 VBP1P61758 197 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 RPP38P78345 283 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 HOXC5Q00444 222 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF117Q03924 483 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CHRNB3Q05901 458 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 INPP5JQ15735 1006 aaPredicted RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 TBR1Q16650 682 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 NRF1Q16656 503 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF829Q3KNS6 432 aaPredicted RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 FAM98BQ52LJ0 330 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 IFI44LQ53G44 452 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 TMEM81Q6P7N7 255 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 IGFL2Q6UWQ7 119 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CARM1Q86X55 608 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 GPALPP1Q8IXQ4 340 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 GALNT11Q8NCW6 608 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 FAM71CQ8NEG0 241 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 OR6T1Q8NGN1 323 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 DUSP19Q8WTR2 217 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 HAS2Q92819 552 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 USB1Q9BQ65 265 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 OSBPL11Q9BXB4 747 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 HES7Q9BYE0 225 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 RNF32Q9H0A6 362 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 PROK2Q9HC23 129 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 IL1RAPQ9NPH3 570 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CCM2LQ9NUG4 571 aaPredicted RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 KLHL28Q9NXS3 571 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 POU2F3Q9UKI9 436 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CNOT11Q9UKZ1 510 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 EDARQ9UNE0 448 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SLC9A8Q9Y2E8 581 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 PCDHGA9Q9Y5G4 932 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 WIF1Q9Y5W5 379 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SVILO95425 2214 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF407Q9C0G0 2248 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SPTA1P02549 2419 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 hCG_2039718K7EN88 272 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 GTPBP1O00178 669 aaKnown RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 OIP5O43482 229 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 HCRTR2O43614 444 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SEMA7AO75326 666 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 P04436 131 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 RAP2AP10114 183 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 PRG2P13727 222 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SLC7A1P30825 629 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ETV1P50549 477 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CCR4P51679 360 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 RGS8P57771 180 aaPredicted RBP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 C17orf67Q0P5P2 114 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SKP2Q13309 424 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SNTA1Q13424 505 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 TBCELQ5QJ74 424 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 ZDHHC21Q8IVQ6 265 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CMIPQ8IY22 773 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 STMN2Q93045 179 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 C7orf34Q96L11 122 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 PRR14Q9BWN1 585 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 AMBRA1Q9C0C7 1298 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCAF4-204ENST00000467731 MAGIXQ9H6Y5 334 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 SACM1LQ9NTJ5 587 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 DEPPQ9NTK1 212 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 CNIH4Q9P003 139 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 HRH3Q9Y5N1 445 aa6.26□□□□□ -1.41
SCAF4-204ENST00000467731 KALRNO60229 2985 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms