RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ADH6P28332 368 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 EIF1P41567 113 aaKnown RBP10.08□□□□□ -0.8
VCP-204ENST00000466100 LIMS1P48059 325 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 GFRA1P56159 465 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 TAS2R41P59536 307 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 COPZ1P61923 177 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ULK3Q6PHR2 472 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 LINC00114Q6XXX2 140 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 GRINAQ7Z429 371 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 YRDCQ86U90 279 aaKnown RBP10.08□□□□□ -0.8
VCP-204ENST00000466100 LILRA2Q8N149 483 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 CADM2Q8N3J6 435 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ZNF563Q8TA94 476 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 DNAJA4Q8WW22 397 aaPredicted RBP10.08□□□□□ -0.8
VCP-204ENST00000466100 TMEM234Q8WY98 164 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 NR4A3Q92570 626 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 SLC41A3Q96GZ6 507 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ZNF347Q96SE7 839 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 BARD1Q99728 777 aaKnown RBP10.08□□□□□ -0.8
VCP-204ENST00000466100 SLC6A15Q9H2J7 730 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 TMEM27Q9HBJ8 222 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 S100A14Q9HCY8 104 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ACKR4Q9NPB9 350 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 AGPAT4Q9NRZ5 378 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
VCP-204ENST00000466100 AP4S1Q9Y587 144 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 LIPGQ9Y5X9 500 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 IGKV1D-42A0A075B6H8 117 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 A0A087WUJ7 227 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TMED7-TICAM2A0A0A6YYA0 188 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 A0A1W2PRQ8 180 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TFECO14948 347 aaPredicted RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 IL11P20809 199 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TCEA1P23193 301 aaKnown RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 ELK4P28324 431 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TACR3P29371 465 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 RRM2P31350 389 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 POLR2HP52434 150 aaKnown RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 HMGA2P52926 109 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 MERTKQ12866 999 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 DGCR6Q14129 220 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 ATP6AP1Q15904 470 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 ALG10BQ5I7T1 473 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 COLEC12Q5KU26 742 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 WIPI1Q5MNZ9 446 aaPredicted RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 OR2T5Q6IEZ7 315 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 HMBOX1Q6NT76 420 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 AAGABQ6PD74 315 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TRILQ7L0X0 811 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 ADGRG3Q86Y34 549 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 NKAIN4Q8IVV8 208 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TEX19Q8NA77 164 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 OR4C15Q8NGM1 316 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 OR5M1Q8NGP8 315 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 OR2T29Q8NH02 315 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 DTNBP1Q96EV8 351 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 ANKRD19PQ9H560 264 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 YY1AP1Q9H869 796 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 NMNAT1Q9HAN9 279 aaPredicted RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 SLC7A7Q9UM01 511 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 RPH3AQ9Y2J0 694 aaPredicted RBP10.07□□□□□ -0.8
VCP-204ENST00000466100 TMED7Q9Y3B3 224 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 TESMINQ9Y4I5 508 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 LYVE1Q9Y5Y7 322 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 POLEQ07864 2286 aa10.07□□□□□ -0.8
VCP-204ENST00000466100 RELNP78509 3460 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 ADAMDEC1O15204 470 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 ATXN7O15265 892 aaPredicted RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 CLOCKO15516 846 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 NPIPB7O75200 414 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 CST1P01037 141 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 CRYABP02511 175 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 H1F0P07305 194 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 PNMTP11086 282 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 FCGR1AP12314 374 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 CHMP24386 653 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 APOBEC1P41238 236 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 HTR3AP46098 478 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 TDGF1P3P51864 188 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 SPIBQ01892 262 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 ALDH6A1Q02252 535 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 EGR4Q05215 589 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 ST3GAL3Q11203 375 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 PRR30Q53SZ7 412 aaPredicted RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 NHSL2Q5HYW2 709 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 RAET1LQ5VY80 246 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 TMEM179BQ7Z7N9 219 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 CHERPQ8IWX8 916 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 OR14L1PQ8NHC6 308 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 SLC7A13Q8TCU3 470 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms