RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MTHFD2LQ9H903 347 aaPredicted RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 ZNF175Q9Y473 711 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 HEATR5BQ9P2D3 2071 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 A0A1B0GW55 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 TRAPPC13A5PLN9 417 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 ZNF879B4DU55 563 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 K7ESM1 405 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 PRKRAO75569 313 aaKnown RBP18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L2P0CJ85 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L3P0CJ86 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L4P0CJ87 422 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L5P0CJ88 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L6P0CJ89 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4L7P0CJ90 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 SYN1P17600 705 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 SDHBP21912 280 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 GDI2P50395 445 aaKnown RBP18.27■□□□□ 0.51
SDF4-205ENST00000465727 ACTA2P62736 377 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 ACTG2P63267 376 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 PUS10Q3MIT2 529 aaKnown RBP18.27■□□□□ 0.51
SDF4-205ENST00000465727 OR5M10Q6IEU7 315 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.51
SDF4-205ENST00000465727 IZUMO1Q8IYV9 350 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 TET1Q8NFU7 2136 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 OR52I2Q8NH67 350 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 C15orf40Q8WUR7 153 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 PRSS27Q9BQR3 290 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 MS4A7Q9GZW8 240 aaPredicted RBP18.27■□□□□ 0.51
SDF4-205ENST00000465727 DUX4Q9UBX2 424 aa18.27■□□□□ 0.51
SDF4-205ENST00000465727 KHDRBS3O75525 346 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 AQP8O94778 261 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 LDOC1O95751 146 aaPredicted RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 POU3F2P20265 443 aaPredicted RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 PSMB5P28074 263 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 PTGER1P34995 402 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 DLX5P56178 289 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 CSNK1G2P78368 415 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 DPTQ07507 201 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 GAS6Q14393 721 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ZNF169Q14929 603 aaPredicted RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 POM121L1PQ3SYA9 428 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 TMEM215Q68D42 235 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 MRM1Q6IN84 353 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 SLC48A1Q6P1K1 146 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 FAM199XQ6PEV8 388 aaPredicted RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 LRFN4Q6PJG9 635 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 HDDC3Q8N4P3 179 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 OR5T2Q8NGG2 359 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 MARC2Q969Z3 335 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 PNPLA2Q96AD5 504 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ORAI3Q9BRQ5 295 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 EQTNQ9NQ60 294 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 MRPL15Q9P015 296 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PPV9 198 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 A0A1W2PR48 441 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 D6RAR5 112 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 LCMT2O60294 686 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 FCMRO60667 390 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 NDUFB6O95139 128 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ZIC2O95409 532 aaPredicted RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 PROS1P07225 676 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ZNF3P17036 446 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 MC3RP41968 323 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 PDX1P52945 283 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 DUSP2Q05923 314 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ZMYND11Q15326 602 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 CEBPEQ15744 281 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 GSG1LQ6UXU4 331 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 FRRS1Q6ZNA5 592 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 CDK20Q8IZL9 346 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 ADAMTS15Q8TE58 950 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 PIGKQ92643 395 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 PAWRQ96IZ0 340 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 MENTQ9BUN1 341 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 AK6Q9Y3D8 172 aaKnown RBP18.26■□□□□ 0.51
SDF4-205ENST00000465727 IRAK3Q9Y616 596 aa18.26■□□□□ 0.51
SDF4-205ENST00000465727 TCF20Q9UGU0 1960 aaKnown RBP18.25■□□□□ 0.51
SDF4-205ENST00000465727 ANXA2P2A6NMY6 339 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 ABCD4O14678 606 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 PPM1DO15297 605 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 MAKP20794 623 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 HIST1H1TP22492 207 aaPredicted RBP18.25■□□□□ 0.51
SDF4-205ENST00000465727 MAZP56270 477 aaKnown RBP18.25■□□□□ 0.51
SDF4-205ENST00000465727 FLI1Q01543 452 aaPredicted RBP18.25■□□□□ 0.51
SDF4-205ENST00000465727 ILF3Q12906 894 aaKnown RBP eCLIP18.25■□□□□ 0.51
SDF4-205ENST00000465727 NOGQ13253 232 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 IL10RAQ13651 578 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 TCTN1Q2MV58 587 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 SFRP5Q5T4F7 317 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 TMPRSS11FQ6ZWK6 438 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 SYT9Q86SS6 491 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 ZNF454Q8N9F8 522 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 CLRN3Q8NCR9 226 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 OR5M9Q8NGP3 310 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 OR1S1Q8NH92 325 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 CYB5D2Q8WUJ1 264 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 TMEM239Q8WW34 195 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 IRF7Q92985 503 aa18.25■□□□□ 0.51
SDF4-205ENST00000465727 CES1P1Q9UKY3 287 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms