RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 SLC43A2Q8N370 569 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 CNOT9Q92600 299 aaKnown RBP13.9□□□□□ -0.18
SCAP-209ENST00000465628 ZG16BQ96DA0 208 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 CCDC28BQ9BUN5 200 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 LIME1Q9H400 295 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
SCAP-209ENST00000465628 CCDC167Q9P0B6 97 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 CHRNA9Q9UGM1 479 aa13.9□□□□□ -0.18
SCAP-209ENST00000465628 C5orf58C9J3I9 102 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 SULT2B1O00204 365 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 FESP07332 822 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 NID1P14543 1247 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 CD1EP15812 388 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 APOBEC1P41238 236 aaKnown RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 IST1P53990 364 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 RAC3P60763 192 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 SQLEQ14534 574 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 RPS26P11Q5JNZ5 115 aaPredicted RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 BEND4Q6ZU67 534 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 TUSC5Q8IXB3 177 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 OR52P1PQ8NH57 321 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 NINJ1Q92982 152 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 ZNF524Q96C55 264 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 SPDL1Q96EA4 605 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 PIK3IP1Q96FE7 263 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 MAGEB18Q96M61 343 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 TACO1Q9BSH4 297 aaKnown RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 MTHFD2LQ9H903 347 aaPredicted RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 CTPS2Q9NRF8 586 aa13.89□□□□□ -0.19
SCAP-209ENST00000465628 CCM2LQ9NUG4 571 aaPredicted RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 THUMPD1Q9NXG2 353 aaKnown RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 HRNRQ86YZ3 2850 aaPredicted RBP13.89□□□□□ -0.19
SCAP-209ENST00000465628 ABCA4P78363 2273 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 FAM221AA4D161 298 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 AP3D1O14617 1153 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 RAF1P04049 648 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 HRGP04196 525 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
SCAP-209ENST00000465628 DIO1P49895 249 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 LARS2Q15031 903 aaKnown RBP13.88□□□□□ -0.19
SCAP-209ENST00000465628 AGKQ53H12 422 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 ZNF440Q8IYI8 595 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 TMEM19Q96HH6 336 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 ACTR6Q9GZN1 396 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 PLSCR4Q9NRQ2 329 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 ZNF443Q9Y2A4 671 aaPredicted RBP13.88□□□□□ -0.19
SCAP-209ENST00000465628 F8P00451 2351 aa13.88□□□□□ -0.19
SCAP-209ENST00000465628 AKAP9Q99996 3911 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 A0A096LPI6 279 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 CLIC1O00299 241 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 ETV2O00321 342 aaPredicted RBP13.87□□□□□ -0.19
SCAP-209ENST00000465628 DNAJA2O60884 412 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 YES1P07947 543 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
SCAP-209ENST00000465628 IL32P24001 234 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 HTR3AP46098 478 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 PCYT1AP49585 367 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
SCAP-209ENST00000465628 OR2B6P58173 313 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 COPZ1P61923 177 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 FADDQ13158 208 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 ZNF836Q6ZNA1 936 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 NUFIP2Q7Z417 695 aaKnown RBP13.87□□□□□ -0.19
SCAP-209ENST00000465628 VRK2Q86Y07 508 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 WFDC8Q8IUA0 241 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 SLC38A5Q8WUX1 472 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 GTF2H4Q92759 462 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 DDIT4LQ96D03 193 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 CCDC106Q9BWC9 280 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 OR11A1Q9GZK7 315 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 PAIP1Q9H074 479 aaKnown RBP13.87□□□□□ -0.19
SCAP-209ENST00000465628 UBTD1Q9HAC8 227 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 NPHS2Q9NP85 383 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 EMC3Q9P0I2 261 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 TRIM33Q9UPN9 1127 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 PCDHB14Q9Y5E9 798 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 CELSR1Q9NYQ6 3014 aa13.87□□□□□ -0.19
SCAP-209ENST00000465628 TMED7-TICAM2A0A0A6YYA0 188 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 A0A0G2JND7 137 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 SMAD9O15198 467 aaKnown RBP13.86□□□□□ -0.19
SCAP-209ENST00000465628 PPP3CBP16298 524 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 CRYGSP22914 178 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 TACR3P29371 465 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 GCNT6Q5T4J0 391 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 TFAP2EQ6VUC0 442 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 TMPPEQ6ZT21 453 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 CXorf67Q86X51 503 aaPredicted RBP13.86□□□□□ -0.19
SCAP-209ENST00000465628 ZNF100Q8IYN0 542 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 PMM1Q92871 262 aa13.86□□□□□ -0.19
SCAP-209ENST00000465628 MAL2Q969L2 176 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms