RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 ZNF614Q8N883 585 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-224ENST00000464148 CDS1Q92903 461 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 APH1AQ96BI3 265 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 PPCDCQ96CD2 204 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 L3HYPDHQ96EM0 354 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 ASB6Q9NWX5 421 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
MRPL55-224ENST00000464148 NOSIPQ9Y314 301 aaKnown RBP11.68□□□□□ -0.54
MRPL55-224ENST00000464148 SHOX2O60902 331 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-224ENST00000464148 GSTA1P08263 222 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 SRP14P37108 136 aaKnown RBP11.67□□□□□ -0.54
MRPL55-224ENST00000464148 MDH1P40925 334 aaKnown RBP11.67□□□□□ -0.54
MRPL55-224ENST00000464148 DIO1P49895 249 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 QPRTQ15274 297 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 KLHL26Q53HC5 615 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF385BQ569K4 471 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 OR7E24Q6IFN5 339 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 CDC73Q6P1J9 531 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 C3orf33Q6P1S2 294 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 TRIM46Q7Z4K8 759 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 MEX3DQ86XN8 651 aaKnown RBP11.67□□□□□ -0.54
MRPL55-224ENST00000464148 TOR1AIP2Q8NFQ8 470 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 FBXO17Q96EF6 278 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 C1orf159Q96HA4 380 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 FOXN4Q96NZ1 517 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 GSTO2Q9H4Y5 243 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 REEP4Q9H6H4 257 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 TRAF6Q9Y4K3 522 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 PLCE1Q9P212 2302 aa11.67□□□□□ -0.54
MRPL55-224ENST00000464148 IGHV4-61A0A0C4DH41 118 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 LOC390937A0A1W2PQ73 354 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 TMEM120BA0PK00 339 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 SULT2B1O00204 365 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 H6PDO95479 791 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 HMGN2P05204 90 aaKnown RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 ITGA2P17301 1181 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 EFNA1P20827 205 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 CFPP27918 469 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 CSNK2A1P68400 391 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 PHC1P78364 1004 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 CBFBQ13951 182 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 LASP1Q14847 261 aaKnown RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 MLC1Q15049 377 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 TIGD2Q4W5G0 525 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 SLC25A53Q5H9E4 307 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 OR5W2Q8NH69 310 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 FAM120BQ96EK7 910 aaKnown RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF764Q96H86 408 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 STACQ99469 402 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 QRSL1Q9H0R6 528 aaKnown RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 PIGUQ9H490 435 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 SERINC1Q9NRX5 453 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 ACSS1Q9NUB1 689 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 ZCCHC3Q9NUD5 404 aaKnown RBP11.66□□□□□ -0.54
MRPL55-224ENST00000464148 MKS1Q9NXB0 559 aa11.66□□□□□ -0.54
MRPL55-224ENST00000464148 A0A1W2PPM1 405 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF264O43296 627 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 TYROBPO43914 113 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 CYP7B1O75881 506 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 UBL4AP11441 157 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 CREB1P16220 341 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF23P17027 643 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 KRT4P19013 534 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 FRKP42685 505 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ATP12AP54707 1039 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 SNRPD2P62316 118 aaKnown RBP11.65□□□□□ -0.54
MRPL55-224ENST00000464148 MPP2Q14168 576 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 GABRA6Q16445 453 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 LCA5Q86VQ0 697 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF540Q8NDQ6 660 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ACMSDQ8TDX5 336 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ADAMTS15Q8TE58 950 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ZNF524Q96C55 264 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ZHX1-C8orf76Q96EF9 292 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 METTL2AQ96IZ6 378 aaKnown RBP11.65□□□□□ -0.54
MRPL55-224ENST00000464148 MUS81Q96NY9 551 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 TSSK3Q96PN8 268 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 SORCS2Q96PQ0 1159 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 VRK1Q99986 396 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-224ENST00000464148 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 C1orf109Q9NX04 203 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 DTNAQ9Y4J8 743 aa11.65□□□□□ -0.54
MRPL55-224ENST00000464148 IGKV3D-15A0A087WSY6 115 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 ATP6V1G2-DDX39BF2Z307 99 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 GPR171O14626 319 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 EIF4E2O60573 245 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 TBX19O60806 448 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MRPL33O75394 65 aaKnown RBP11.64□□□□□ -0.55
MRPL55-224ENST00000464148 TFPIP10646 304 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 MERTKQ12866 999 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 KIAA0040Q15053 153 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 PDK3Q15120 406 aa11.64□□□□□ -0.55
MRPL55-224ENST00000464148 SWI5Q1ZZU3 235 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms