RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MTDHQ86UE4 582 aaKnown RBP15.2■□□□□ 0.02
HMGN1-210ENST00000464078 NATD1Q8N6N6 113 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 OR7A2PQ8NGA2 310 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 APH1AQ96BI3 265 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 ZNF775Q96BV0 537 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-210ENST00000464078 TXLNGYQ9BZA5 131 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 QRSL1Q9H0R6 528 aaKnown RBP15.2■□□□□ 0.02
HMGN1-210ENST00000464078 MANSC1Q9H8J5 431 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 SERINC1Q9NRX5 453 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 ATAD3AQ9NVI7 634 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 TAS2R16Q9NYV7 291 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 SULT2B1O00204 365 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 DNPH1O43598 174 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 BMP4P12644 408 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 USF1P22415 310 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-210ENST00000464078 MAPK1P28482 360 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 ZNF83P51522 516 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 SLC16A1P53985 500 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 SESN3P58005 492 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 ZNF141Q15928 474 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 C1QTNF12Q5T7M4 302 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 DEPDC4Q8N2C3 294 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 FAM71CQ8NEG0 241 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 OR52N5Q8NH56 324 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 RFWD2Q8NHY2 731 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 OIT3Q8WWZ8 545 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 TMEM234Q8WY98 164 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 HTRA1Q92743 480 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 MUS81Q96NY9 551 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 SDF2Q99470 211 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 C19orf24Q9BVV8 132 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 ASB6Q9NWX5 421 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 FIS1Q9Y3D6 152 aa15.19■□□□□ 0.02
HMGN1-210ENST00000464078 HEATR1Q9H583 2144 aaKnown RBP15.19■□□□□ 0.02
HMGN1-210ENST00000464078 CIB4A0PJX0 185 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 PDLIM1O00151 329 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 GPR171O14626 319 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 LMX1BO60663 402 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 LYPLA1O75608 230 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 AK1P00568 194 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 IGHV3-9P01782 118 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 FGF4P08620 206 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 IGFBP5P24593 272 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 GZMKP49863 264 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 FABP6P51161 128 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 MERTKQ12866 999 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 PTGR1Q14914 329 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 GABRA6Q16445 453 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 LSM12Q3MHD2 195 aaKnown RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 UGT3A2Q3SY77 523 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 SPDYE7PQ495Y7 208 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 XKR7Q5GH72 579 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 BHLHB9Q6PI77 547 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 UBE2J2Q8N2K1 259 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 TWIST2Q8WVJ9 160 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 COQ8BQ96D53 544 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 OR7D2Q96RA2 312 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 THUMPD3Q9BV44 507 aaKnown RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 GATA5Q9BWX5 397 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 ACER3Q9NUN7 267 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 KCNE5Q9UJ90 142 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 MID2Q9UJV3 735 aa15.18■□□□□ 0.02
HMGN1-210ENST00000464078 NOSIPQ9Y314 301 aaKnown RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 SPIN1Q9Y657 262 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-210ENST00000464078 VWC2LB2RUY7 222 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 PMS2P2O95744 297 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 C6orf47O95873 294 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 SRD5A1P18405 259 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 PGCP20142 388 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 LSM11P83369 360 aaKnown RBP eCLIP15.17■□□□□ 0.02
HMGN1-210ENST00000464078 CHRNEQ04844 493 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 CHRNB3Q05901 458 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 PCLAFQ15004 111 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 C10orf107Q8IVU9 208 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 DDIASQ8IXT1 998 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 C17orf78Q8N4C9 275 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 CCDC63Q8NA47 563 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 C1orf162Q8NEQ5 155 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-210ENST00000464078 OR5D16Q8NGK9 328 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 PIGXQ8TBF5 258 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 ZHX1-C8orf76Q96EF9 292 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 PPP3R2Q96LZ3 170 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 C16orf45Q96MC5 204 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-210ENST00000464078 CCDC106Q9BWC9 280 aa15.17■□□□□ 0.02
HMGN1-210ENST00000464078 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 DUXAA6NLW8 204 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 CCT8L1PA6NM43 557 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 TMEM233B4DJY2 109 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 M0R1B8 84 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 NDUFS8O00217 210 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 COPEO14579 308 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 PIP5K1BO14986 540 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 STX11O75558 287 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 UGT2B17O75795 530 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 CSTAP01040 98 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 ITGA5P08648 1049 aa15.16■□□□□ 0.02
HMGN1-210ENST00000464078 FKBP2P26885 142 aaKnown RBP15.16■□□□□ 0.02
HMGN1-210ENST00000464078 NTF4P34130 210 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms